Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RN7SL447P-201ENST00000494711 245 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AP003497.1-201ENST00000528472 562 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC008752.3-201ENST00000588113 712 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC004853.1-201ENST00000604902 698 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC113194.1-201ENST00000606037 500 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC019193.2-201ENST00000610012 634 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC068870.2-201ENST00000620635 389 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC091953.2-201ENST00000623979 160 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC005224.3-201ENST00000584683 2140 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AL022323.4-201ENST00000623980 13120 ntBASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NPAS4Q8IUM7 AC083837.1-201ENST00000565297 2994 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 ZNF33CP-201ENST00000432492 2030 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 PABPC1P7-201ENST00000413177 1513 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 Y_RNA.162-201ENST00000363683 102 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 Y_RNA.263-201ENST00000364659 114 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 RN7SKP6-201ENST00000364795 319 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 Y_RNA.295-201ENST00000364918 102 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 MT-TC-201ENST00000387405 66 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AL603766.1-201ENST00000407763 664 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 RPS20P15-201ENST00000412792 311 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AF228730.4-201ENST00000421457 183 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 RPS12P5-201ENST00000423449 371 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC008850.1-201ENST00000427546 362 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 MEMO1P4-201ENST00000453590 386 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC022364.2-201ENST00000457963 554 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 RPSAP50-201ENST00000481955 852 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC114786.4-201ENST00000508771 728 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC107918.3-201ENST00000533272 382 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AK6P1-201ENST00000540219 478 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC005498.1-201ENST00000592125 465 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC006115.2-201ENST00000596823 202 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC010424.2-201ENST00000607594 443 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AL136295.6-201ENST00000610486 658 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC135507.2-201ENST00000612443 309 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC025574.2-201ENST00000615621 514 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AC112487.2-201ENST00000637950 304 ntBASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
NPAS4Q8IUM7 AP000547.3-204ENST00000588548 2523 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 ASNSP1-201ENST00000518311 1939 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 RNU4-73P-201ENST00000363164 141 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 RNU6-1322P-201ENST00000364309 107 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 SNORA70H-201ENST00000383910 135 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 SNORA70J-201ENST00000384182 135 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 RNU6-456P-201ENST00000384493 107 ntBASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NPAS4Q8IUM7 AC004987.3-201ENST00000413879 771 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms