Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
FOXR1Q6PIV2 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 RNU6-251P-201ENST00000363235 104 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 RNA5SP478-201ENST00000364657 115 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 RN7SKP78-201ENST00000364711 318 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 RNY4P16-201ENST00000364768 94 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 RNU6-1013P-201ENST00000384180 107 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AL929472.1-201ENST00000417484 429 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 OSTCP4-201ENST00000424397 449 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 SKA2P1-201ENST00000425592 390 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 RPS7P5-201ENST00000441482 581 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AC015911.1-201ENST00000495111 156 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 Y_RNA.661-201ENST00000516003 99 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 RNU6-566P-201ENST00000516790 107 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 HIGD1AP6-201ENST00000521833 279 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AC008126.1-201ENST00000549019 480 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 MIR4790-201ENST00000577799 79 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AC121334.2-201ENST00000605387 271 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AL355810.1-201ENST00000614629 552 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 CR381572.1-201ENST00000625098 102 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 AC116667.2-201ENST00000641075 823 ntBASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXR1Q6PIV2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC068870.3-201ENST00000625077 2536 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 U3.12-201ENST00000364498 214 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 RNU6-316P-201ENST00000391027 107 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 RNU6-1109P-201ENST00000391187 107 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 SOD2P1-201ENST00000396543 562 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 DHFRP6-201ENST00000401776 268 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 RNU2-36P-201ENST00000410361 191 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 RNA5SP345-201ENST00000410646 108 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 RAC1P6-201ENST00000423911 575 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 HMGB1P9-201ENST00000429856 646 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 DDX3P2-201ENST00000446138 111 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 RPL31P50-201ENST00000471002 296 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC104109.1-201ENST00000498563 436 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 TMEM251P1-201ENST00000503717 318 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 HSPD1P15-201ENST00000505573 1122 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms