Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC015726.1-201ENST00000602353 681 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AC005776.1-201ENST00000603164 290 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AC006254.3-201ENST00000603353 884 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AC079610.2-201ENST00000604818 690 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.38□□□□□ -1.87
RFX4Q33E94 U6.48-201ENST00000618523 106 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AC022149.2-201ENST00000621061 203 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 MIR6500-201ENST00000622700 86 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AL732618.1-201ENST00000623251 301 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RFX4Q33E94 AC097372.4-201ENST00000625025 466 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 AC068647.1-201ENST00000489539 2265 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.38□□□□□ -1.87
RFX4Q33E94 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX4Q33E94 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX4Q33E94 AL512283.1-201ENST00000606756 1384 ntBASIC3.38□□□□□ -1.87
RFX4Q33E94 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFX4Q33E94 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFX4Q33E94 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.37□□□□□ -1.87
RFX4Q33E94 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFX4Q33E94 SNORA73.2-201ENST00000364946 201 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 SNORA62-201ENST00000365493 153 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 RNU6-213P-201ENST00000384051 104 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 HMGB3P18-201ENST00000406327 590 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 SNORA3.3-201ENST00000408712 125 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 RNA5SP317-201ENST00000410176 116 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 RNA5SP311-201ENST00000411290 116 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 RNU2-6P-201ENST00000411404 190 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 AC004987.3-201ENST00000413879 771 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 AL158050.1-201ENST00000416077 457 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 AC068533.1-201ENST00000418542 415 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX4Q33E94 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFX4Q33E94 EIF2S2P3-201ENST00000428356 999 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 C4BPAP2-201ENST00000428434 478 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 ELOCP11-201ENST00000436690 332 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.37□□□□□ -1.87
RFX4Q33E94 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.37□□□□□ -1.87
RFX4Q33E94 ELOCP16-201ENST00000444494 332 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.37□□□□□ -1.87
RFX4Q33E94 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX4Q33E94 PPIAP3-201ENST00000450588 505 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.37□□□□□ -1.87
RFX4Q33E94 RPL12P26-201ENST00000452430 487 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.37□□□□□ -1.87
RFX4Q33E94 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.37□□□□□ -1.87
RFX4Q33E94 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.37□□□□□ -1.87
RFX4Q33E94 RNA5SP315-201ENST00000516340 116 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 RNA5SP312-201ENST00000517068 116 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.37□□□□□ -1.87
RFX4Q33E94 IGKV2-36-201ENST00000519999 223 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFX4Q33E94 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.37□□□□□ -1.87
RFX4Q33E94 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.37□□□□□ -1.87
RFX4Q33E94 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RFX4Q33E94 AC120057.2-201ENST00000571520 271 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.37□□□□□ -1.87
RFX4Q33E94 AC012254.4-201ENST00000588843 273 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.37□□□□□ -1.87
RFX4Q33E94 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.37□□□□□ -1.87
RFX4Q33E94 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.37□□□□□ -1.87
RFX4Q33E94 MIR4278-201ENST00000636094 69 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 AC083865.1-201ENST00000636634 831 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 U6.107-201ENST00000637108 79 ntBASIC3.37□□□□□ -1.87
RFX4Q33E94 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFX4Q33E94 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFX4Q33E94 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFX4Q33E94 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.36□□□□□ -1.87
RFX4Q33E94 AC000367.1-201ENST00000452711 1766 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFX4Q33E94 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RFX4Q33E94 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFX4Q33E94 MIR30E-201ENST00000362104 92 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 RNU6-543P-201ENST00000362576 108 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFX4Q33E94 ATF1P1-201ENST00000406040 927 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 U3.39-201ENST00000408569 239 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 RPS7P13-201ENST00000413955 498 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX4Q33E94 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX4Q33E94 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.36□□□□□ -1.87
RFX4Q33E94 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.36□□□□□ -1.87
RFX4Q33E94 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.36□□□□□ -1.87
RFX4Q33E94 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RFX4Q33E94 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
RFX4Q33E94 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.36□□□□□ -1.87
RFX4Q33E94 RPL37P6-202ENST00000464216 403 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AC022034.3-201ENST00000471393 478 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 RN7SL442P-201ENST00000473804 320 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AC078785.3-201ENST00000476607 425 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AC021205.2-201ENST00000480069 347 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AC104687.1-201ENST00000485829 412 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 UBE2CP3-201ENST00000502715 450 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX4Q33E94 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.36□□□□□ -1.87
RFX4Q33E94 AC010285.3-201ENST00000511668 676 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 RN7SKP289-201ENST00000517244 295 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.36□□□□□ -1.87
RFX4Q33E94 OR7E13P-201ENST00000526052 910 ntBASIC3.36□□□□□ -1.87
RFX4Q33E94 HIGD1AP5-201ENST00000529959 259 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms