Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 RWDD4P2-201ENST00000426392 563 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 HMGB3P5-201ENST00000428894 612 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC023347.2-201ENST00000433994 462 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC092170.1-201ENST00000440211 356 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC009263.1-201ENST00000441193 1239 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AL096829.2-201ENST00000446582 742 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC010655.1-201ENST00000449336 292 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC068587.1-201ENST00000483613 781 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 FCF1P3-201ENST00000496394 590 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 HMGB1P21-201ENST00000502313 581 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC110792.2-201ENST00000510278 224 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 HMGN1P15-201ENST00000513870 295 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 RN7SKP82-201ENST00000516786 223 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 RANP9-201ENST00000519957 271 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC026333.2-201ENST00000542164 106 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC010680.3-201ENST00000604215 520 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 BNIP3P19-201ENST00000605397 577 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC026741.1-201ENST00000605892 482 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AL121772.2-201ENST00000614331 297 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC017104.5-201ENST00000637647 639 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC009452.1-201ENST00000640823 606 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 AC104446.1-201ENST00000613728 1321 ntBASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO1Q2MKA7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC007685.1-201ENST00000329806 452 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 SNORA63.3-201ENST00000362682 132 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 RNU6-354P-201ENST00000383862 107 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 RNU6-610P-201ENST00000384264 107 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 RN7SKP159-201ENST00000410657 292 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 RPL30P2-201ENST00000414021 291 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AL445183.3-201ENST00000414168 502 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 DBIP2-201ENST00000419076 262 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 MTCO2P1-201ENST00000424648 477 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 NIPA2P1-201ENST00000426223 976 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC006994.1-201ENST00000438212 839 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 NDUFS5P3-201ENST00000450668 321 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 GTF2IP12-201ENST00000456547 356 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 RPS17P11-201ENST00000474297 293 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC106872.2-201ENST00000494303 480 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC139103.1-201ENST00000534696 1030 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC092851.1-201ENST00000535964 478 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 TOMM20P2-201ENST00000540082 421 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AL392112.1-201ENST00000605115 829 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AP005229.2-201ENST00000609980 697 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AC018926.1-201ENST00000616335 435 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AL590396.2-201ENST00000636511 1041 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 MTCO1P6-201ENST00000481192 1384 ntBASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO1Q2MKA7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RSPO1Q2MKA7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.1□□□□□ -1.91
RSPO1Q2MKA7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.1□□□□□ -1.91
RSPO1Q2MKA7 CEP170P1-201ENST00000502249 4587 ntBASIC3.1□□□□□ -1.91
RSPO1Q2MKA7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RSPO1Q2MKA7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RSPO1Q2MKA7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RSPO1Q2MKA7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms