Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CYCSP35-201ENST00000451978 304 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 RPL32P14-201ENST00000463196 378 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 RPS4XP10-201ENST00000465034 731 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.2□□□□□ -1.74
GABPAQ06546 AC090819.1-201ENST00000523800 1111 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.2□□□□□ -1.74
GABPAQ06546 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.2□□□□□ -1.74
GABPAQ06546 AC106734.1-201ENST00000568646 663 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 MIR3908-201ENST00000579798 126 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.2□□□□□ -1.74
GABPAQ06546 MIR7851-201ENST00000610611 160 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 CR392039.4-201ENST00000624968 501 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.2□□□□□ -1.74
GABPAQ06546 U6.107-201ENST00000637108 79 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 AC132825.7-201ENST00000638744 335 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 AL451142.2-201ENST00000429076 2090 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.2□□□□□ -1.74
GABPAQ06546 MFSD8-213ENST00000641134 1327 ntBASIC4.2□□□□□ -1.74
GABPAQ06546 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.2□□□□□ -1.74
GABPAQ06546 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
GABPAQ06546 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GABPAQ06546 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
GABPAQ06546 AC017007.4-201ENST00000503353 1352 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.19□□□□□ -1.74
GABPAQ06546 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
GABPAQ06546 RNU4-35P-201ENST00000362588 141 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 RNU6-984P-201ENST00000363236 109 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 RNA5SP267-201ENST00000364893 126 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
GABPAQ06546 RNA5SP39-201ENST00000411245 120 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 RN7SKP53-201ENST00000411337 315 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 HMGB3P31-201ENST00000413333 595 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 RPS12P5-201ENST00000423449 371 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 OSTCP5-201ENST00000425293 453 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GABPAQ06546 USP12PY-201ENST00000427677 1064 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.19□□□□□ -1.74
GABPAQ06546 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.19□□□□□ -1.74
GABPAQ06546 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.19□□□□□ -1.74
GABPAQ06546 TRBV8-2-201ENST00000475637 270 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 MTND6P6-201ENST00000478031 263 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 SETP6-201ENST00000479329 568 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 RPL21P47-201ENST00000483696 477 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.19□□□□□ -1.74
GABPAQ06546 AL358832.1-201ENST00000497800 389 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
GABPAQ06546 AC121161.1-201ENST00000510606 652 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.19□□□□□ -1.74
GABPAQ06546 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.19□□□□□ -1.74
GABPAQ06546 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.19□□□□□ -1.74
GABPAQ06546 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.19□□□□□ -1.74
GABPAQ06546 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.19□□□□□ -1.74
GABPAQ06546 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
GABPAQ06546 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.19□□□□□ -1.74
GABPAQ06546 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.19□□□□□ -1.74
GABPAQ06546 AC068446.3-201ENST00000555285 382 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 MTATP6P2-201ENST00000603319 678 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 AL161756.2-201ENST00000604597 246 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.19□□□□□ -1.74
GABPAQ06546 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GABPAQ06546 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
GABPAQ06546 AC073569.3-201ENST00000619055 682 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.19□□□□□ -1.74
GABPAQ06546 AL732372.2-225ENST00000642124 456 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 AL353743.4-201ENST00000422653 1547 ntBASIC4.19□□□□□ -1.74
GABPAQ06546 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.19□□□□□ -1.74
GABPAQ06546 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
GABPAQ06546 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
GABPAQ06546 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
GABPAQ06546 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
GABPAQ06546 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
GABPAQ06546 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
GABPAQ06546 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.18□□□□□ -1.74
GABPAQ06546 AC018555.1-201ENST00000567548 1980 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.18□□□□□ -1.74
GABPAQ06546 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
GABPAQ06546 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
GABPAQ06546 SNORA63.3-201ENST00000362682 132 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 SNORD56.4-201ENST00000363883 71 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 RNA5SP42-201ENST00000364278 115 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
GABPAQ06546 HMGN2P8-201ENST00000391458 268 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 AC093422.3-201ENST00000428506 305 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
GABPAQ06546 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.18□□□□□ -1.74
GABPAQ06546 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.18□□□□□ -1.74
GABPAQ06546 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.18□□□□□ -1.74
GABPAQ06546 RPL26P28-201ENST00000451325 435 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.18□□□□□ -1.74
GABPAQ06546 FGF7P3-201ENST00000454645 303 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 AC007967.1-201ENST00000455422 1159 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.18□□□□□ -1.74
GABPAQ06546 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.18□□□□□ -1.74
GABPAQ06546 AC025518.1-201ENST00000479856 347 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.18□□□□□ -1.74
GABPAQ06546 AC016550.1-201ENST00000505348 785 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.18□□□□□ -1.74
GABPAQ06546 AC010342.1-201ENST00000514047 877 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 C1DP5-201ENST00000525775 383 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 AP000916.1-201ENST00000533869 835 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms