Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 RPS15AP1-201ENST00000457423 391 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 RPL37P6-202ENST00000464216 403 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 RPL23AP67-201ENST00000465341 474 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 RPS20P21-201ENST00000466859 343 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC005726.1-201ENST00000494679 427 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC245166.1-201ENST00000521012 253 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AP006245.1-201ENST00000522549 120 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC136624.4-201ENST00000573044 370 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 MAGOH2P-202ENST00000584384 429 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AC107982.3-201ENST00000584957 985 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AL133393.1-201ENST00000603277 287 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AL161912.3-201ENST00000605404 628 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 AL391497.1-201ENST00000608671 547 ntBASIC2.67□□□□□ -1.98
HIST1H1AQ02539 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HIST1H1AQ02539 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 API5P2-201ENST00000397055 1498 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 HMGB3P18-201ENST00000406327 590 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 SNORA11B-201ENST00000408175 129 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 RN7SKP123-201ENST00000410732 291 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 RN7SKP263-201ENST00000411194 309 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AL513174.1-201ENST00000423182 629 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC084357.1-201ENST00000473404 255 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AP000563.1-201ENST00000490865 758 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC093663.1-201ENST00000497190 394 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 NPM1P41-201ENST00000512920 831 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC026402.1-201ENST00000513642 170 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 IGKV2D-19-201ENST00000523346 262 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC026333.2-201ENST00000542164 106 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 CENPUP2-201ENST00000555897 1186 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC034268.2-201ENST00000571784 482 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC022916.3-201ENST00000592961 742 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC067959.1-201ENST00000604334 379 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC099676.1-201ENST00000608886 657 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC069209.1-201ENST00000619282 651 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 MFSD8-233ENST00000641482 4860 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 AC008264.2-201ENST00000610193 3731 ntBASIC2.66□□□□□ -1.98
HIST1H1AQ02539 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.66□□□□□ -1.98
HIST1H1AQ02539 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
HIST1H1AQ02539 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.65□□□□□ -1.98
HIST1H1AQ02539 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HIST1H1AQ02539 XPOTP1-201ENST00000443317 2398 ntBASIC2.65□□□□□ -1.98
HIST1H1AQ02539 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AL031121.1-201ENST00000406553 254 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 RANP4-201ENST00000413361 655 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 SDCBPP2-201ENST00000424643 885 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AL031736.2-201ENST00000426573 787 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 RPL29P29-201ENST00000448725 423 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 RN7SL594P-201ENST00000470590 287 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 RPS26P21-201ENST00000475397 348 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AL161747.1-201ENST00000480068 358 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 SETP14-201ENST00000497538 873 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms