Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.08□□□□□ -1.76
CDK3Q00526 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDK3Q00526 AC084290.1-201ENST00000434995 374 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.08□□□□□ -1.76
CDK3Q00526 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.08□□□□□ -1.76
CDK3Q00526 MTND5P28-201ENST00000438005 1594 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.08□□□□□ -1.76
CDK3Q00526 RPS26P56-201ENST00000444468 240 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK3Q00526 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK3Q00526 RPL36AP13-201ENST00000457490 317 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 AC011979.1-201ENST00000472300 483 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 AP000893.1-201ENST00000474462 794 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 AC108734.3-201ENST00000481241 1165 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDK3Q00526 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.08□□□□□ -1.76
CDK3Q00526 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.08□□□□□ -1.76
CDK3Q00526 SNX5P1-201ENST00000505757 1041 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 AC018797.3-201ENST00000513388 1241 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK3Q00526 AC087808.1-201ENST00000520501 361 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.08□□□□□ -1.76
CDK3Q00526 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.08□□□□□ -1.76
CDK3Q00526 AC084824.1-201ENST00000550917 1005 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 AL161713.1-201ENST00000555538 145 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.08□□□□□ -1.76
CDK3Q00526 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.08□□□□□ -1.76
CDK3Q00526 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.08□□□□□ -1.76
CDK3Q00526 AGGF1P8-201ENST00000562979 1000 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 MTCYBP28-201ENST00000566728 1132 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 HNRNPCP4-201ENST00000571636 900 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 BNIP3P38-201ENST00000601117 544 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 VN1R85P-201ENST00000601587 426 ntBASIC4.08□□□□□ -1.76
CDK3Q00526 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.08□□□□□ -1.76
CDK3Q00526 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.08□□□□□ -1.76
CDK3Q00526 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK3Q00526 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDK3Q00526 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CDK3Q00526 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK3Q00526 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDK3Q00526 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDK3Q00526 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDK3Q00526 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDK3Q00526 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CDK3Q00526 Z82217.1-201ENST00000625157 8149 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CDK3Q00526 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDK3Q00526 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.07□□□□□ -1.76
CDK3Q00526 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK3Q00526 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDK3Q00526 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDK3Q00526 SNORD116.1-201ENST00000365628 92 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 SNORA57.1-201ENST00000391227 145 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 PPIAP31-201ENST00000405422 495 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 ZNF603P-201ENST00000405613 487 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CDK3Q00526 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CDK3Q00526 MRPS36P1-201ENST00000421291 307 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 OR4F13P-201ENST00000428478 931 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AL117339.2-201ENST00000430475 180 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 B3GNT2P1-201ENST00000434960 952 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK3Q00526 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK3Q00526 PNPLA4P1-201ENST00000458328 305 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 RPL7P1-201ENST00000468161 747 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 RPL7P9-201ENST00000468715 747 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDK3Q00526 AC087879.1-201ENST00000474343 374 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK3Q00526 BOLA3P3-201ENST00000505182 232 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AC114322.1-201ENST00000506771 926 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDK3Q00526 AC021146.3-201ENST00000511911 260 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.07□□□□□ -1.76
CDK3Q00526 AP001189.2-201ENST00000527320 189 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
CDK3Q00526 PTP4A1P6-201ENST00000531034 478 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 OR8R1P-201ENST00000543943 764 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK3Q00526 MTND4P33-201ENST00000556706 766 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 GTF2IP8-201ENST00000560687 584 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.07□□□□□ -1.76
CDK3Q00526 MIR4458-201ENST00000578872 75 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AC234772.3-201ENST00000602277 528 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.07□□□□□ -1.76
CDK3Q00526 AC024941.1-201ENST00000612250 334 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK3Q00526 AC131238.1-201ENST00000617135 328 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AC022509.4-201ENST00000621404 572 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 MIR7702-201ENST00000621931 59 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AP006248.2-201ENST00000623309 592 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AP000770.2-201ENST00000623694 100 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 AC098679.5-201ENST00000624394 571 ntBASIC4.07□□□□□ -1.76
CDK3Q00526 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CDK3Q00526 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK3Q00526 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms