Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC244205.2-202ENST00000635781 342 ntBASIC2.77□□□□□ -1.97
CMC4P56277 AC091948.2-201ENST00000636510 279 ntBASIC2.77□□□□□ -1.97
CMC4P56277 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CMC4P56277 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
CMC4P56277 MTND5P28-201ENST00000438005 1594 ntBASIC2.77□□□□□ -1.97
CMC4P56277 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.77□□□□□ -1.97
CMC4P56277 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.77□□□□□ -1.97
CMC4P56277 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.77□□□□□ -1.97
CMC4P56277 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CMC4P56277 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CMC4P56277 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
CMC4P56277 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CMC4P56277 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.76□□□□□ -1.97
CMC4P56277 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CMC4P56277 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.76□□□□□ -1.97
CMC4P56277 MTND4P8-201ENST00000514997 1362 ntBASIC2.76□□□□□ -1.97
CMC4P56277 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.76□□□□□ -1.97
CMC4P56277 ZNF962P-201ENST00000443465 3140 ntBASIC2.76□□□□□ -1.97
CMC4P56277 MFSD8-233ENST00000641482 4860 ntBASIC2.76□□□□□ -1.97
CMC4P56277 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CMC4P56277 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CMC4P56277 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CMC4P56277 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CMC4P56277 AL359837.1-201ENST00000381357 287 ntBASIC2.76□□□□□ -1.97
CMC4P56277 HMGN2P8-201ENST00000391458 268 ntBASIC2.76□□□□□ -1.97
CMC4P56277 PTMAP2-201ENST00000397627 327 ntBASIC2.76□□□□□ -1.97
CMC4P56277 RPL31P2-201ENST00000413849 377 ntBASIC2.76□□□□□ -1.97
CMC4P56277 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.76□□□□□ -1.97
CMC4P56277 HMGB3P20-201ENST00000417997 600 ntBASIC2.76□□□□□ -1.97
CMC4P56277 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.76□□□□□ -1.97
CMC4P56277 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CMC4P56277 SNORA71B-202ENST00000439232 272 ntBASIC2.76□□□□□ -1.97
CMC4P56277 NOTCH2P1-201ENST00000443481 624 ntBASIC2.76□□□□□ -1.97
CMC4P56277 HMGN2P21-201ENST00000447764 270 ntBASIC2.76□□□□□ -1.97
CMC4P56277 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.76□□□□□ -1.97
CMC4P56277 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CMC4P56277 ANP32BP2-201ENST00000454525 545 ntBASIC2.76□□□□□ -1.97
CMC4P56277 FGF7P3-201ENST00000454645 303 ntBASIC2.76□□□□□ -1.97
CMC4P56277 HMGB3P30-201ENST00000457863 606 ntBASIC2.76□□□□□ -1.97
CMC4P56277 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.76□□□□□ -1.97
CMC4P56277 AC015724.1-201ENST00000478577 156 ntBASIC2.76□□□□□ -1.97
CMC4P56277 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.76□□□□□ -1.97
CMC4P56277 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.76□□□□□ -1.97
CMC4P56277 UBE2CP3-201ENST00000502715 450 ntBASIC2.76□□□□□ -1.97
CMC4P56277 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CMC4P56277 AC093853.1-201ENST00000515689 483 ntBASIC2.76□□□□□ -1.97
CMC4P56277 RN7SKP83-201ENST00000516512 178 ntBASIC2.76□□□□□ -1.97
CMC4P56277 NARSP2-201ENST00000518524 679 ntBASIC2.76□□□□□ -1.97
CMC4P56277 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.76□□□□□ -1.97
CMC4P56277 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.76□□□□□ -1.97
CMC4P56277 OSBPL9P3-201ENST00000534523 595 ntBASIC2.76□□□□□ -1.97
CMC4P56277 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CMC4P56277 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.76□□□□□ -1.97
CMC4P56277 AC007424.1-203ENST00000554613 687 ntBASIC2.76□□□□□ -1.97
CMC4P56277 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
CMC4P56277 AC006270.2-201ENST00000578523 652 ntBASIC2.76□□□□□ -1.97
CMC4P56277 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.76□□□□□ -1.97
CMC4P56277 AC012254.4-201ENST00000588843 273 ntBASIC2.76□□□□□ -1.97
CMC4P56277 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.76□□□□□ -1.97
CMC4P56277 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.76□□□□□ -1.97
CMC4P56277 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.76□□□□□ -1.97
CMC4P56277 AC010591.1-201ENST00000603941 649 ntBASIC2.76□□□□□ -1.97
CMC4P56277 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.76□□□□□ -1.97
CMC4P56277 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.76□□□□□ -1.97
CMC4P56277 AL732618.1-201ENST00000623251 301 ntBASIC2.76□□□□□ -1.97
CMC4P56277 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.76□□□□□ -1.97
CMC4P56277 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CMC4P56277 KPNA2P2-201ENST00000419546 1489 ntBASIC2.76□□□□□ -1.97
CMC4P56277 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CMC4P56277 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CMC4P56277 AC107081.3-201ENST00000612715 2034 ntBASIC2.75□□□□□ -1.97
CMC4P56277 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CMC4P56277 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CMC4P56277 USP8P1-201ENST00000494673 3183 ntBASIC2.75□□□□□ -1.97
CMC4P56277 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.75□□□□□ -1.97
CMC4P56277 RNA5SP502-201ENST00000362694 119 ntBASIC2.75□□□□□ -1.97
CMC4P56277 RNA5SP479-201ENST00000364858 117 ntBASIC2.75□□□□□ -1.97
CMC4P56277 SNORA62.3-201ENST00000365110 153 ntBASIC2.75□□□□□ -1.97
CMC4P56277 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CMC4P56277 FABP12P1-201ENST00000401911 322 ntBASIC2.75□□□□□ -1.97
CMC4P56277 RNU4-27P-201ENST00000410889 139 ntBASIC2.75□□□□□ -1.97
CMC4P56277 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.75□□□□□ -1.97
CMC4P56277 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.75□□□□□ -1.97
CMC4P56277 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.75□□□□□ -1.97
CMC4P56277 RPL36AP36-201ENST00000418616 301 ntBASIC2.75□□□□□ -1.97
CMC4P56277 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.75□□□□□ -1.97
CMC4P56277 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.75□□□□□ -1.97
CMC4P56277 FTH1P6-201ENST00000430768 320 ntBASIC2.75□□□□□ -1.97
CMC4P56277 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.75□□□□□ -1.97
CMC4P56277 UBE2V1P5-201ENST00000440070 405 ntBASIC2.75□□□□□ -1.97
CMC4P56277 RPL23AP33-201ENST00000442301 452 ntBASIC2.75□□□□□ -1.97
CMC4P56277 RPS26P56-201ENST00000444468 240 ntBASIC2.75□□□□□ -1.97
CMC4P56277 HMGB1P16-201ENST00000447155 540 ntBASIC2.75□□□□□ -1.97
CMC4P56277 AC233982.1-201ENST00000451247 436 ntBASIC2.75□□□□□ -1.97
CMC4P56277 DNAJC19P8-201ENST00000452887 259 ntBASIC2.75□□□□□ -1.97
CMC4P56277 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.75□□□□□ -1.97
CMC4P56277 SNRPGP5-201ENST00000456003 220 ntBASIC2.75□□□□□ -1.97
CMC4P56277 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.75□□□□□ -1.97
CMC4P56277 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.75□□□□□ -1.97
CMC4P56277 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms