Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC010338.1-201ENST00000621823 717 ntBASIC5.11□□□□□ -1.59
GFRA1P56159 AC024940.5-201ENST00000622889 474 ntBASIC5.11□□□□□ -1.59
GFRA1P56159 AP002505.2-201ENST00000623585 696 ntBASIC5.11□□□□□ -1.59
GFRA1P56159 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.11□□□□□ -1.59
GFRA1P56159 AC024614.3-201ENST00000637860 256 ntBASIC5.11□□□□□ -1.59
GFRA1P56159 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.11□□□□□ -1.59
GFRA1P56159 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA1P56159 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
GFRA1P56159 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA1P56159 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA1P56159 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA1P56159 AC092326.2-201ENST00000624772 1561 ntBASIC5.11□□□□□ -1.59
GFRA1P56159 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA1P56159 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
GFRA1P56159 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.11□□□□□ -1.59
GFRA1P56159 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.11□□□□□ -1.59
GFRA1P56159 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.11□□□□□ -1.59
GFRA1P56159 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.11□□□□□ -1.59
GFRA1P56159 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
GFRA1P56159 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA1P56159 AL451142.2-201ENST00000429076 2090 ntBASIC5.11□□□□□ -1.59
GFRA1P56159 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
GFRA1P56159 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
GFRA1P56159 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.11□□□□□ -1.59
GFRA1P56159 OR55B1P-203ENST00000641518 2602 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.1□□□□□ -1.59
GFRA1P56159 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
GFRA1P56159 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.1□□□□□ -1.59
GFRA1P56159 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
GFRA1P56159 RNU6-1011P-201ENST00000384668 107 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 U3.25-201ENST00000391209 220 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AL592429.1-201ENST00000403909 1473 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 RNU6-373P-201ENST00000411247 98 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 RSU1P3-201ENST00000412878 835 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 RPSAP35-201ENST00000413753 818 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AC079355.1-201ENST00000421770 223 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AC092832.1-201ENST00000422934 400 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.1□□□□□ -1.59
GFRA1P56159 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.1□□□□□ -1.59
GFRA1P56159 MTND1P14-201ENST00000427400 950 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 RBMY2QP-201ENST00000429799 1147 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 RPL23AP30-201ENST00000432419 501 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 ZNF680P1-201ENST00000436625 1469 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.1□□□□□ -1.59
GFRA1P56159 BX679664.2-201ENST00000439282 283 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AL450023.1-201ENST00000450868 751 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
GFRA1P56159 SNORA40.12-201ENST00000516329 111 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 RN7SKP82-201ENST00000516786 223 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 RNU6-835P-201ENST00000516974 104 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.1□□□□□ -1.59
GFRA1P56159 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.1□□□□□ -1.59
GFRA1P56159 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
GFRA1P56159 OR4T1P-201ENST00000554933 911 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.1□□□□□ -1.59
GFRA1P56159 AC107027.3-201ENST00000565095 3473 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AC055876.1-202ENST00000567053 138 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.1□□□□□ -1.59
GFRA1P56159 RNU4-89P-201ENST00000607443 133 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 TUG1_1.1-201ENST00000610654 145 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 RMST_3.1-201ENST00000611651 109 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 DISC2.1-201ENST00000612827 205 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AC010133.1-201ENST00000615809 842 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 uc_338.12-201ENST00000616344 181 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AL356585.4-201ENST00000623078 1229 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AC138649.5-201ENST00000637456 137 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 AL049767.1-202ENST00000637826 242 ntBASIC5.1□□□□□ -1.59
GFRA1P56159 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.1□□□□□ -1.59
GFRA1P56159 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
GFRA1P56159 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GFRA1P56159 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.1□□□□□ -1.59
GFRA1P56159 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA1P56159 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA1P56159 AC008758.3-201ENST00000507003 1829 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA1P56159 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA1P56159 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA1P56159 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.09□□□□□ -1.59
GFRA1P56159 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA1P56159 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.09□□□□□ -1.59
GFRA1P56159 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA1P56159 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.09□□□□□ -1.59
GFRA1P56159 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
GFRA1P56159 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA1P56159 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA1P56159 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA1P56159 RNU4-76P-201ENST00000364509 141 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 RN7SKP124-201ENST00000364730 341 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 RNU6-1158P-201ENST00000391167 107 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 ENSAP1-201ENST00000392855 326 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 RPL11P3-201ENST00000395256 523 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.09□□□□□ -1.59
GFRA1P56159 AL133173.1-201ENST00000423458 397 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.09□□□□□ -1.59
GFRA1P56159 TIMM9P1-201ENST00000436122 256 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms