Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NEK3P51956 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NEK3P51956 RPL23AP57-201ENST00000332361 466 ntBASIC4.87□□□□□ -1.63
NEK3P51956 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.87□□□□□ -1.63
NEK3P51956 MIR192-201ENST00000384915 110 ntBASIC4.87□□□□□ -1.63
NEK3P51956 U3.30-201ENST00000391308 210 ntBASIC4.87□□□□□ -1.63
NEK3P51956 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
NEK3P51956 ATP5F1P3-201ENST00000397213 657 ntBASIC4.87□□□□□ -1.63
NEK3P51956 AL590084.2-201ENST00000401481 382 ntBASIC4.87□□□□□ -1.63
NEK3P51956 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.87□□□□□ -1.63
NEK3P51956 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.87□□□□□ -1.63
NEK3P51956 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.87□□□□□ -1.63
NEK3P51956 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.87□□□□□ -1.63
NEK3P51956 AC004938.1-201ENST00000438468 308 ntBASIC4.87□□□□□ -1.63
NEK3P51956 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.87□□□□□ -1.63
NEK3P51956 MTND5P2-201ENST00000442927 1142 ntBASIC4.87□□□□□ -1.63
NEK3P51956 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.87□□□□□ -1.63
NEK3P51956 RPS5P7-201ENST00000456664 608 ntBASIC4.87□□□□□ -1.63
NEK3P51956 AP000563.1-201ENST00000490865 758 ntBASIC4.87□□□□□ -1.63
NEK3P51956 TMEM251P1-201ENST00000503717 318 ntBASIC4.87□□□□□ -1.63
NEK3P51956 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.87□□□□□ -1.63
NEK3P51956 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.87□□□□□ -1.63
NEK3P51956 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.87□□□□□ -1.63
NEK3P51956 AC010625.1-201ENST00000511296 403 ntBASIC4.87□□□□□ -1.63
NEK3P51956 AC021146.3-201ENST00000511911 260 ntBASIC4.87□□□□□ -1.63
NEK3P51956 MRPS33P3-201ENST00000513456 322 ntBASIC4.87□□□□□ -1.63
NEK3P51956 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.87□□□□□ -1.63
NEK3P51956 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NEK3P51956 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.87□□□□□ -1.63
NEK3P51956 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NEK3P51956 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.87□□□□□ -1.63
NEK3P51956 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.87□□□□□ -1.63
NEK3P51956 AL049839.1-201ENST00000556151 657 ntBASIC4.87□□□□□ -1.63
NEK3P51956 MTND3P12-201ENST00000559068 328 ntBASIC4.87□□□□□ -1.63
NEK3P51956 AC107954.1-201ENST00000565906 727 ntBASIC4.87□□□□□ -1.63
NEK3P51956 MIR4330-201ENST00000579077 105 ntBASIC4.87□□□□□ -1.63
NEK3P51956 SNORA74C-1-201ENST00000580726 201 ntBASIC4.87□□□□□ -1.63
NEK3P51956 MAGOH2P-202ENST00000584384 429 ntBASIC4.87□□□□□ -1.63
NEK3P51956 AL669831.4-202ENST00000590817 238 ntBASIC4.87□□□□□ -1.63
NEK3P51956 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.87□□□□□ -1.63
NEK3P51956 AC083899.3-201ENST00000603413 594 ntBASIC4.87□□□□□ -1.63
NEK3P51956 AC005086.4-201ENST00000623065 213 ntBASIC4.87□□□□□ -1.63
NEK3P51956 AL049536.1-201ENST00000625043 744 ntBASIC4.87□□□□□ -1.63
NEK3P51956 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.87□□□□□ -1.63
NEK3P51956 MTND2P41-201ENST00000637599 773 ntBASIC4.87□□□□□ -1.63
NEK3P51956 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.87□□□□□ -1.63
NEK3P51956 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.87□□□□□ -1.63
NEK3P51956 AC108751.5-201ENST00000492880 1336 ntBASIC4.87□□□□□ -1.63
NEK3P51956 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NEK3P51956 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.87□□□□□ -1.63
NEK3P51956 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NEK3P51956 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
NEK3P51956 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.87□□□□□ -1.63
NEK3P51956 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.87□□□□□ -1.63
NEK3P51956 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.86□□□□□ -1.63
NEK3P51956 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NEK3P51956 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NEK3P51956 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NEK3P51956 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NEK3P51956 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NEK3P51956 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NEK3P51956 OR52B1P-201ENST00000316506 909 ntBASIC4.86□□□□□ -1.63
NEK3P51956 RNU6-462P-201ENST00000362659 105 ntBASIC4.86□□□□□ -1.63
NEK3P51956 RNA5SP443-201ENST00000363083 132 ntBASIC4.86□□□□□ -1.63
NEK3P51956 RNY3P9-201ENST00000384727 106 ntBASIC4.86□□□□□ -1.63
NEK3P51956 MIR298-201ENST00000401212 88 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AL121972.1-201ENST00000402023 252 ntBASIC4.86□□□□□ -1.63
NEK3P51956 PIGPP2-201ENST00000411569 458 ntBASIC4.86□□□□□ -1.63
NEK3P51956 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.86□□□□□ -1.63
NEK3P51956 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.86□□□□□ -1.63
NEK3P51956 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.86□□□□□ -1.63
NEK3P51956 FNDC3CP-201ENST00000420795 1155 ntBASIC4.86□□□□□ -1.63
NEK3P51956 MTCO2P5-201ENST00000422621 426 ntBASIC4.86□□□□□ -1.63
NEK3P51956 OR2B7P-201ENST00000429302 934 ntBASIC4.86□□□□□ -1.63
NEK3P51956 BMS1P19-201ENST00000433925 393 ntBASIC4.86□□□□□ -1.63
NEK3P51956 SNRPEP7-201ENST00000438350 220 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AL138878.2-201ENST00000440581 1241 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.86□□□□□ -1.63
NEK3P51956 AC073264.2-201ENST00000448886 166 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AL513533.1-201ENST00000453728 415 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.86□□□□□ -1.63
NEK3P51956 FAM172BP-201ENST00000487497 1089 ntBASIC4.86□□□□□ -1.63
NEK3P51956 RPS4XP18-201ENST00000495480 763 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AC104685.1-201ENST00000502445 371 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.86□□□□□ -1.63
NEK3P51956 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NEK3P51956 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.86□□□□□ -1.63
NEK3P51956 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NEK3P51956 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.86□□□□□ -1.63
NEK3P51956 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.86□□□□□ -1.63
NEK3P51956 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.86□□□□□ -1.63
NEK3P51956 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.86□□□□□ -1.63
NEK3P51956 AC053481.3-201ENST00000577881 843 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AC090616.5-202ENST00000582111 297 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.86□□□□□ -1.63
NEK3P51956 AC022726.1-201ENST00000587475 207 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AC020914.6-201ENST00000594327 272 ntBASIC4.86□□□□□ -1.63
NEK3P51956 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.86□□□□□ -1.63
NEK3P51956 AL139344.1-201ENST00000605228 195 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AL121932.1-201ENST00000605542 214 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms