Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 snoU13.7-201ENST00000459220 104 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 AC104689.1-201ENST00000473356 768 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 AC104687.1-201ENST00000485829 412 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 RPS4XP15-201ENST00000489210 795 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 HIGD1AP3-201ENST00000515857 278 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DMAP28067 RNU2-27P-201ENST00000516185 142 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 RNA5SP164-201ENST00000516533 110 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 AP003717.3-201ENST00000544832 1180 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 AL365400.2-201ENST00000605604 902 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 Mico1.1-201ENST00000611698 204 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DMAP28067 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DMAP28067 RNU6-156P-201ENST00000621869 107 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 LINC00216-201ENST00000623548 1126 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 AF001550.2-201ENST00000636643 217 ntBASIC3.1□□□□□ -1.91
HLA-DMAP28067 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DMAP28067 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DMAP28067 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DMAP28067 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC110774.1-201ENST00000623567 2018 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC093010.3-201ENST00000570269 15214 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 RPL7P26-201ENST00000333817 754 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DMAP28067 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DMAP28067 MIR7-1-201ENST00000384871 110 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 RPL21P3-201ENST00000395517 478 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 MTCYBP24-201ENST00000420387 1106 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC007394.1-201ENST00000421941 531 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 OR2B8P-201ENST00000432841 938 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AL357552.1-201ENST00000445254 415 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 RSL24D1P2-201ENST00000445584 366 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC146507.2-201ENST00000460608 476 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC107398.1-201ENST00000486904 505 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC093663.1-201ENST00000497190 394 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC108078.3-201ENST00000502633 489 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AP001207.1-201ENST00000524051 481 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC026333.2-201ENST00000542164 106 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC015726.1-201ENST00000602353 681 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 BX322635.1-201ENST00000605804 496 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 U73479.1-201ENST00000618062 168 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DMAP28067 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
HLA-DMAP28067 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
HLA-DMAP28067 AP001350.1-201ENST00000601906 1524 ntBASIC3.09□□□□□ -1.92
HLA-DMAP28067 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMAP28067 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMAP28067 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMAP28067 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AC083799.1-201ENST00000366451 910 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMAP28067 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 AL445189.1-201ENST00000405722 338 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 AL513174.1-201ENST00000423182 629 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 RPL21P66-201ENST00000426566 466 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AC023141.6-201ENST00000429418 337 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 RPL23AP69-201ENST00000431134 458 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 MTCO1P57-201ENST00000432182 261 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms