Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AL132838.2-201ENST00000492041 314 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 NDUFB4P9-201ENST00000511646 388 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 HNRNPKP5-201ENST00000515300 253 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC008802.1-201ENST00000519121 791 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC007224.1-201ENST00000564410 144 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AL513477.2-201ENST00000607858 568 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC068722.2-201ENST00000618734 544 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC233309.1-201ENST00000619522 751 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC068831.8-201ENST00000620171 435 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AC124312.6-202ENST00000623624 418 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 USP8P1-201ENST00000494673 3183 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 AL133383.2-201ENST00000622958 2336 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 ZNF962P-201ENST00000443465 3140 ntBASIC4.04□□□□□ -1.76
HLA-DPA1P20036 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
HLA-DPA1P20036 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC016588.2-201ENST00000632484 3021 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 SPRR2C-201ENST00000290702 219 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 RNU6-263P-201ENST00000363811 107 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 OR1L1-202ENST00000373686 1083 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 Y_RNA.493-201ENST00000384422 102 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 RPL22P22-201ENST00000395439 379 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 RPL7AP73-201ENST00000413490 353 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AL356095.1-201ENST00000417217 199 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 FO393414.1-201ENST00000428697 1184 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC239367.2-201ENST00000447309 705 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC006518.2-201ENST00000542513 940 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC025588.3-201ENST00000604182 274 ntBASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DPA1P20036 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC117529.2-201ENST00000512159 2068 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 RNU6-619P-201ENST00000365146 108 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 RNU1-13P-201ENST00000384499 162 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 MTCO2P31-201ENST00000402702 684 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 RN7SKP263-201ENST00000411194 309 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 PTP4A1P5-201ENST00000420305 455 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 IFNNP1-201ENST00000429219 553 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC011742.1-201ENST00000431448 434 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms