Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATF4P18848 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATF4P18848 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
ATF4P18848 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATF4P18848 EXOC5P1-201ENST00000510543 1969 ntBASIC5.19□□□□□ -1.58
ATF4P18848 Y_RNA.72-201ENST00000362894 103 ntBASIC5.19□□□□□ -1.58
ATF4P18848 SDCBPP3-201ENST00000419629 891 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AC134879.1-201ENST00000426062 394 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AC083862.1-201ENST00000427378 1242 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AC018804.1-201ENST00000430381 618 ntBASIC5.19□□□□□ -1.58
ATF4P18848 MTND3P23-201ENST00000431980 347 ntBASIC5.19□□□□□ -1.58
ATF4P18848 FTLP17-201ENST00000432567 525 ntBASIC5.19□□□□□ -1.58
ATF4P18848 MTATP6P16-201ENST00000434543 526 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AC004866.2-201ENST00000438285 481 ntBASIC5.19□□□□□ -1.58
ATF4P18848 KRT8P51-201ENST00000438938 274 ntBASIC5.19□□□□□ -1.58
ATF4P18848 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.19□□□□□ -1.58
ATF4P18848 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.19□□□□□ -1.58
ATF4P18848 MTCO3P45-201ENST00000443036 613 ntBASIC5.19□□□□□ -1.58
ATF4P18848 MED28P3-201ENST00000444288 531 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.19□□□□□ -1.58
ATF4P18848 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.19□□□□□ -1.58
ATF4P18848 AC006967.1-201ENST00000467608 589 ntBASIC5.19□□□□□ -1.58
ATF4P18848 RPS16P9-201ENST00000477220 427 ntBASIC5.19□□□□□ -1.58
ATF4P18848 RNA5SP230-201ENST00000517039 122 ntBASIC5.19□□□□□ -1.58
ATF4P18848 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.19□□□□□ -1.58
ATF4P18848 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.19□□□□□ -1.58
ATF4P18848 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.19□□□□□ -1.58
ATF4P18848 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.19□□□□□ -1.58
ATF4P18848 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.19□□□□□ -1.58
ATF4P18848 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.19□□□□□ -1.58
ATF4P18848 AC073916.1-201ENST00000545095 130 ntBASIC5.19□□□□□ -1.58
ATF4P18848 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.19□□□□□ -1.58
ATF4P18848 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.19□□□□□ -1.58
ATF4P18848 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.19□□□□□ -1.58
ATF4P18848 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.19□□□□□ -1.58
ATF4P18848 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.19□□□□□ -1.58
ATF4P18848 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.19□□□□□ -1.58
ATF4P18848 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.19□□□□□ -1.58
ATF4P18848 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATF4P18848 PRPF19P1-201ENST00000584766 898 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AF038458.1-201ENST00000588406 262 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AL670379.6-201ENST00000603753 252 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AL670379.11-201ENST00000604059 253 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AC008162.1-201ENST00000604718 254 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AL670379.1-201ENST00000604752 252 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AL670379.5-201ENST00000605253 252 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AL670379.12-201ENST00000605291 253 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AL670379.8-201ENST00000605353 252 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AL670379.7-201ENST00000605823 252 ntBASIC5.19□□□□□ -1.58
ATF4P18848 RMST_3.1-201ENST00000611651 109 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AC079776.5-201ENST00000641920 211 ntBASIC5.19□□□□□ -1.58
ATF4P18848 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATF4P18848 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATF4P18848 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATF4P18848 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.19□□□□□ -1.58
ATF4P18848 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
ATF4P18848 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 Z97989.1-201ENST00000531702 2421 ntBASIC5.18□□□□□ -1.58
ATF4P18848 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
ATF4P18848 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
ATF4P18848 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
ATF4P18848 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 AL354685.2-201ENST00000448218 1447 ntBASIC5.18□□□□□ -1.58
ATF4P18848 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 Y_RNA.86-201ENST00000363020 111 ntBASIC5.18□□□□□ -1.58
ATF4P18848 RNU6-179P-201ENST00000363350 107 ntBASIC5.18□□□□□ -1.58
ATF4P18848 RNA5SP429-201ENST00000363688 109 ntBASIC5.18□□□□□ -1.58
ATF4P18848 SNORA62.1-201ENST00000364287 154 ntBASIC5.18□□□□□ -1.58
ATF4P18848 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.18□□□□□ -1.58
ATF4P18848 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
ATF4P18848 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
ATF4P18848 RNA5SP280-201ENST00000411230 115 ntBASIC5.18□□□□□ -1.58
ATF4P18848 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.18□□□□□ -1.58
ATF4P18848 RPL12P9-201ENST00000412942 488 ntBASIC5.18□□□□□ -1.58
ATF4P18848 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.18□□□□□ -1.58
ATF4P18848 AC138761.5-201ENST00000433967 325 ntBASIC5.18□□□□□ -1.58
ATF4P18848 AC128677.1-201ENST00000436016 442 ntBASIC5.18□□□□□ -1.58
ATF4P18848 AL356121.1-201ENST00000442911 156 ntBASIC5.18□□□□□ -1.58
ATF4P18848 DBIL5P2-201ENST00000443827 253 ntBASIC5.18□□□□□ -1.58
ATF4P18848 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ATF4P18848 GOT2P2-201ENST00000450663 1251 ntBASIC5.18□□□□□ -1.58
ATF4P18848 CACYBPP2-201ENST00000453625 678 ntBASIC5.18□□□□□ -1.58
ATF4P18848 PMCHL2-203ENST00000457791 237 ntBASIC5.18□□□□□ -1.58
ATF4P18848 RPS27AP17-201ENST00000463344 455 ntBASIC5.18□□□□□ -1.58
ATF4P18848 RPS7P10-201ENST00000464254 603 ntBASIC5.18□□□□□ -1.58
ATF4P18848 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.18□□□□□ -1.58
ATF4P18848 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.18□□□□□ -1.58
ATF4P18848 RNU6-507P-201ENST00000516045 100 ntBASIC5.18□□□□□ -1.58
ATF4P18848 RNU6-875P-201ENST00000516488 106 ntBASIC5.18□□□□□ -1.58
ATF4P18848 RNU6-1092P-201ENST00000516955 87 ntBASIC5.18□□□□□ -1.58
ATF4P18848 AC107952.1-201ENST00000524200 376 ntBASIC5.18□□□□□ -1.58
ATF4P18848 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.18□□□□□ -1.58
ATF4P18848 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.18□□□□□ -1.58
ATF4P18848 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms