Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.19□□□□□ -1.58
CFTRP13569 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.19□□□□□ -1.58
CFTRP13569 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CFTRP13569 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CFTRP13569 AC108206.1-201ENST00000570186 4159 ntBASIC5.18□□□□□ -1.58
CFTRP13569 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CFTRP13569 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.18□□□□□ -1.58
CFTRP13569 OR56A5-201ENST00000340110 738 ntBASIC5.18□□□□□ -1.58
CFTRP13569 MIR448-201ENST00000362131 111 ntBASIC5.18□□□□□ -1.58
CFTRP13569 MIR34A-201ENST00000385130 110 ntBASIC5.18□□□□□ -1.58
CFTRP13569 MRPL50P2-201ENST00000416821 482 ntBASIC5.18□□□□□ -1.58
CFTRP13569 AC073587.1-201ENST00000447093 876 ntBASIC5.18□□□□□ -1.58
CFTRP13569 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.18□□□□□ -1.58
CFTRP13569 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.18□□□□□ -1.58
CFTRP13569 RFPL4AP5-201ENST00000514977 504 ntBASIC5.18□□□□□ -1.58
CFTRP13569 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CFTRP13569 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.18□□□□□ -1.58
CFTRP13569 USP33-201ENST00000357428 4155 ntTSL 5 BASIC5.17□□□□□ -1.58
CFTRP13569 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.17□□□□□ -1.58
CFTRP13569 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CFTRP13569 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.17□□□□□ -1.58
CFTRP13569 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.17□□□□□ -1.58
CFTRP13569 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.17□□□□□ -1.58
CFTRP13569 YWHAEP4-201ENST00000505390 198 ntBASIC5.17□□□□□ -1.58
CFTRP13569 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.17□□□□□ -1.58
CFTRP13569 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.17□□□□□ -1.58
CFTRP13569 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC5.17□□□□□ -1.58
CFTRP13569 AC124856.1-201ENST00000600819 896 ntBASIC5.17□□□□□ -1.58
CFTRP13569 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.17□□□□□ -1.58
CFTRP13569 AC103858.2-201ENST00000621471 543 ntBASIC5.17□□□□□ -1.58
CFTRP13569 AC244205.2-202ENST00000635781 342 ntBASIC5.17□□□□□ -1.58
CFTRP13569 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.17□□□□□ -1.58
CFTRP13569 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC5.17□□□□□ -1.58
CFTRP13569 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CFTRP13569 AC021755.1-201ENST00000559747 1447 ntBASIC5.17□□□□□ -1.58
CFTRP13569 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CFTRP13569 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.16□□□□□ -1.58
CFTRP13569 AC017007.4-201ENST00000503353 1352 ntBASIC5.16□□□□□ -1.58
CFTRP13569 RANP4-201ENST00000413361 655 ntBASIC5.16□□□□□ -1.58
CFTRP13569 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.16□□□□□ -1.58
CFTRP13569 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.16□□□□□ -1.58
CFTRP13569 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CFTRP13569 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.16□□□□□ -1.58
CFTRP13569 AL034351.1-201ENST00000605288 668 ntBASIC5.16□□□□□ -1.58
CFTRP13569 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.16□□□□□ -1.58
CFTRP13569 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CFTRP13569 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CFTRP13569 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CFTRP13569 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.16□□□□□ -1.58
CFTRP13569 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CFTRP13569 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC5.16□□□□□ -1.58
CFTRP13569 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CFTRP13569 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CFTRP13569 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
CFTRP13569 GNG5P5-201ENST00000420444 220 ntBASIC5.15□□□□□ -1.58
CFTRP13569 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.15□□□□□ -1.58
CFTRP13569 RN7SKP272-201ENST00000516988 232 ntBASIC5.15□□□□□ -1.58
CFTRP13569 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.15□□□□□ -1.58
CFTRP13569 OR5G4P-201ENST00000525251 760 ntBASIC5.15□□□□□ -1.58
CFTRP13569 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.15□□□□□ -1.58
CFTRP13569 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.15□□□□□ -1.58
CFTRP13569 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CFTRP13569 OR4C2P-201ENST00000530855 1064 ntBASIC5.15□□□□□ -1.58
CFTRP13569 AL049874.4-201ENST00000557593 255 ntBASIC5.15□□□□□ -1.58
CFTRP13569 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.15□□□□□ -1.58
CFTRP13569 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.15□□□□□ -1.58
CFTRP13569 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CFTRP13569 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CFTRP13569 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CFTRP13569 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CFTRP13569 RNU1-89P-201ENST00000384592 164 ntBASIC5.14□□□□□ -1.59
CFTRP13569 RNU6-316P-201ENST00000391027 107 ntBASIC5.14□□□□□ -1.59
CFTRP13569 RPL21P40-201ENST00000428586 483 ntBASIC5.14□□□□□ -1.59
CFTRP13569 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC5.14□□□□□ -1.59
CFTRP13569 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.14□□□□□ -1.59
CFTRP13569 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.14□□□□□ -1.59
CFTRP13569 BDH2P1-201ENST00000602288 736 ntBASIC5.14□□□□□ -1.59
CFTRP13569 AC006840.1-201ENST00000623069 542 ntBASIC5.14□□□□□ -1.59
CFTRP13569 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CFTRP13569 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CFTRP13569 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CFTRP13569 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CFTRP13569 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CFTRP13569 MYL8P-204ENST00000431574 518 ntBASIC5.13□□□□□ -1.59
CFTRP13569 AC087499.2-201ENST00000432861 149 ntBASIC5.13□□□□□ -1.59
CFTRP13569 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.13□□□□□ -1.59
CFTRP13569 SNORD109B-201ENST00000458961 67 ntBASIC5.13□□□□□ -1.59
CFTRP13569 SNORD109A-201ENST00000459128 67 ntBASIC5.13□□□□□ -1.59
CFTRP13569 RPL23AP71-201ENST00000470966 469 ntBASIC5.13□□□□□ -1.59
CFTRP13569 SYT14P1-201ENST00000481459 721 ntBASIC5.13□□□□□ -1.59
CFTRP13569 AC012123.2-201ENST00000485809 248 ntBASIC5.13□□□□□ -1.59
CFTRP13569 AC009097.3-201ENST00000563557 1018 ntBASIC5.13□□□□□ -1.59
CFTRP13569 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.13□□□□□ -1.59
CFTRP13569 OR6R2P-201ENST00000609216 300 ntBASIC5.13□□□□□ -1.59
CFTRP13569 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.13□□□□□ -1.59
CFTRP13569 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CFTRP13569 AL356057.1-202ENST00000402263 756 ntBASIC5.13□□□□□ -1.59
CFTRP13569 AL445528.1-201ENST00000426330 420 ntBASIC5.13□□□□□ -1.59
CFTRP13569 AC007563.3-201ENST00000433233 371 ntBASIC5.13□□□□□ -1.59
CFTRP13569 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms