Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RBMY2UP-201ENST00000453474 324 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AC068305.1-201ENST00000497406 726 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AC111193.1-201ENST00000504097 155 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.17□□□□□ -1.74
TOP1P11387 AC008489.1-201ENST00000524271 483 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TOP1P11387 AP000619.3-201ENST00000535634 1127 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.17□□□□□ -1.74
TOP1P11387 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.17□□□□□ -1.74
TOP1P11387 POLR2KP1-201ENST00000553226 168 ntBASIC4.17□□□□□ -1.74
TOP1P11387 CENPUP2-201ENST00000555897 1186 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.17□□□□□ -1.74
TOP1P11387 AC113194.1-201ENST00000606037 500 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AC110792.4-201ENST00000609843 298 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AC019176.2-201ENST00000611579 315 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TOP1P11387 MIR6864-201ENST00000617935 70 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AC022079.2-201ENST00000619739 566 ntBASIC4.17□□□□□ -1.74
TOP1P11387 U7.8-201ENST00000619968 63 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AP003355.3-201ENST00000623465 114 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TOP1P11387 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
TOP1P11387 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.17□□□□□ -1.74
TOP1P11387 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.17□□□□□ -1.74
TOP1P11387 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
TOP1P11387 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.17□□□□□ -1.74
TOP1P11387 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TOP1P11387 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.16□□□□□ -1.74
TOP1P11387 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
TOP1P11387 RNA5SP391-201ENST00000363456 119 ntBASIC4.16□□□□□ -1.74
TOP1P11387 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TOP1P11387 AL512504.1-201ENST00000415494 778 ntBASIC4.16□□□□□ -1.74
TOP1P11387 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.16□□□□□ -1.74
TOP1P11387 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.16□□□□□ -1.74
TOP1P11387 CYCSP43-201ENST00000438233 310 ntBASIC4.16□□□□□ -1.74
TOP1P11387 AL138799.3-201ENST00000438968 350 ntBASIC4.16□□□□□ -1.74
TOP1P11387 RPL9P32-201ENST00000464118 620 ntBASIC4.16□□□□□ -1.74
TOP1P11387 RN7SL293P-201ENST00000481765 281 ntBASIC4.16□□□□□ -1.74
TOP1P11387 AP001086.1-201ENST00000494882 321 ntBASIC4.16□□□□□ -1.74
TOP1P11387 NIPA2P2-201ENST00000496376 1083 ntBASIC4.16□□□□□ -1.74
TOP1P11387 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.16□□□□□ -1.74
TOP1P11387 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.16□□□□□ -1.74
TOP1P11387 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.16□□□□□ -1.74
TOP1P11387 RNU6-551P-201ENST00000516661 103 ntBASIC4.16□□□□□ -1.74
TOP1P11387 OR4C2P-201ENST00000530855 1064 ntBASIC4.16□□□□□ -1.74
TOP1P11387 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.16□□□□□ -1.74
TOP1P11387 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.16□□□□□ -1.74
TOP1P11387 CYP2C60P-201ENST00000566088 139 ntBASIC4.16□□□□□ -1.74
TOP1P11387 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.16□□□□□ -1.74
TOP1P11387 MIR4738-201ENST00000579134 87 ntBASIC4.16□□□□□ -1.74
TOP1P11387 AC007687.1-201ENST00000602704 304 ntBASIC4.16□□□□□ -1.74
TOP1P11387 AC024220.1-201ENST00000603675 484 ntBASIC4.16□□□□□ -1.74
TOP1P11387 BNIP3P7-201ENST00000605641 516 ntBASIC4.16□□□□□ -1.74
TOP1P11387 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.16□□□□□ -1.74
TOP1P11387 AC015967.1-201ENST00000619893 476 ntBASIC4.16□□□□□ -1.74
TOP1P11387 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.16□□□□□ -1.74
TOP1P11387 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.16□□□□□ -1.74
TOP1P11387 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.16□□□□□ -1.74
TOP1P11387 AL049781.1-201ENST00000623195 3585 ntBASIC4.16□□□□□ -1.74
TOP1P11387 AC066616.2-201ENST00000559334 1481 ntBASIC4.16□□□□□ -1.74
TOP1P11387 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TOP1P11387 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
TOP1P11387 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
TOP1P11387 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TOP1P11387 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TOP1P11387 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TOP1P11387 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
TOP1P11387 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
TOP1P11387 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
TOP1P11387 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TOP1P11387 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
TOP1P11387 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TOP1P11387 RNA5SP42-201ENST00000364278 115 ntBASIC4.15□□□□□ -1.75
TOP1P11387 RNU6-283P-201ENST00000364788 107 ntBASIC4.15□□□□□ -1.75
TOP1P11387 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TOP1P11387 MIR183-201ENST00000384958 110 ntBASIC4.15□□□□□ -1.75
TOP1P11387 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.15□□□□□ -1.75
TOP1P11387 U3.39-201ENST00000408569 239 ntBASIC4.15□□□□□ -1.75
TOP1P11387 MTATP6P19-201ENST00000413797 659 ntBASIC4.15□□□□□ -1.75
TOP1P11387 CRYBB2P1-203ENST00000415709 538 ntBASIC4.15□□□□□ -1.75
TOP1P11387 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.15□□□□□ -1.75
TOP1P11387 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.15□□□□□ -1.75
TOP1P11387 ATP5JP1-201ENST00000431631 322 ntBASIC4.15□□□□□ -1.75
TOP1P11387 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.15□□□□□ -1.75
TOP1P11387 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.15□□□□□ -1.75
TOP1P11387 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.15□□□□□ -1.75
TOP1P11387 RPS15AP29-201ENST00000445539 400 ntBASIC4.15□□□□□ -1.75
TOP1P11387 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.15□□□□□ -1.75
TOP1P11387 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
TOP1P11387 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.15□□□□□ -1.75
TOP1P11387 AC005351.1-201ENST00000511152 786 ntBASIC4.15□□□□□ -1.75
TOP1P11387 PTGES3P3-201ENST00000511479 482 ntBASIC4.15□□□□□ -1.75
TOP1P11387 AC023141.12-201ENST00000512399 199 ntBASIC4.15□□□□□ -1.75
TOP1P11387 RNU4-60P-201ENST00000517239 135 ntBASIC4.15□□□□□ -1.75
TOP1P11387 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.15□□□□□ -1.75
TOP1P11387 OR5AP1P-201ENST00000529730 940 ntBASIC4.15□□□□□ -1.75
TOP1P11387 AGGF1P8-201ENST00000562979 1000 ntBASIC4.15□□□□□ -1.75
TOP1P11387 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.15□□□□□ -1.75
TOP1P11387 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.15□□□□□ -1.75
TOP1P11387 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms