Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.28□□□□□ -1.88
HLA-DQB2P05538 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HLA-DQB2P05538 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.28□□□□□ -1.89
HLA-DQB2P05538 AL133383.2-201ENST00000622958 2336 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 RNA5SP267-201ENST00000364893 126 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AC073069.1-201ENST00000428657 441 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 RN7SL442P-201ENST00000473804 320 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 VN1R84P-201ENST00000593697 235 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 ABI1P1-201ENST00000603375 1120 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AC069200.1-201ENST00000609511 323 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 MIR8058-201ENST00000615737 89 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AC244100.1-202ENST00000621554 382 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AL136964.1-201ENST00000622038 2990 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AC091903.1-201ENST00000624322 454 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AC092159.4-201ENST00000624944 550 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AC073476.4-201ENST00000628409 72 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 RIOK3P1-201ENST00000418778 1528 ntBASIC3.27□□□□□ -1.89
HLA-DQB2P05538 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-DQB2P05538 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AL139811.1-201ENST00000424779 2299 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC073464.3-201ENST00000422564 712 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 RPL31P12-201ENST00000422587 358 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC091862.1-201ENST00000438016 1100 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 BTF3P5-201ENST00000457252 467 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 RPL23AP14-201ENST00000468281 468 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 RPL7L1P8-201ENST00000469911 741 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 SNORD116-30-201ENST00000516468 85 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 RNA5SP309-201ENST00000516670 106 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC005412.1-201ENST00000580812 1049 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC010615.3-201ENST00000597319 394 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AL365400.2-201ENST00000605604 902 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC100793.4-201ENST00000613683 429 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 uc_338.25-201ENST00000613756 156 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AL392048.1-201ENST00000613946 534 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AP005212.4-201ENST00000614206 710 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC084757.4-201ENST00000616350 526 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.26□□□□□ -1.89
HLA-DQB2P05538 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HLA-DQB2P05538 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 AC017002.4-201ENST00000604721 1525 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 SNORA63.1-201ENST00000362493 131 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 SNORD56.3-201ENST00000363507 71 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 BX890604.2-201ENST00000427883 474 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 USP9YP7-201ENST00000436723 430 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 AC105402.2-201ENST00000438503 358 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 USP9YP32-201ENST00000452432 430 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 RN7SL601P-201ENST00000471221 293 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 OR5H3P-201ENST00000502817 919 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 AC110794.1-201ENST00000505816 425 ntBASIC3.25□□□□□ -1.89
HLA-DQB2P05538 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DQB2P05538 AC074250.1-201ENST00000511117 192 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms