Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL161909.1-201ENST00000397390 712 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.7□□□□□ -1.82
MT-ND1P03886 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.7□□□□□ -1.82
MT-ND1P03886 AC092634.2-201ENST00000428146 1010 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AC068287.1-201ENST00000430283 295 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.7□□□□□ -1.82
MT-ND1P03886 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.7□□□□□ -1.82
MT-ND1P03886 YWHAZP8-201ENST00000436935 731 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MT-ND1P03886 RPS26P56-201ENST00000444468 240 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.7□□□□□ -1.82
MT-ND1P03886 RPS17P13-201ENST00000448974 407 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.7□□□□□ -1.82
MT-ND1P03886 GAPDHP36-201ENST00000480688 918 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MT-ND1P03886 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.7□□□□□ -1.82
MT-ND1P03886 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.7□□□□□ -1.82
MT-ND1P03886 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.7□□□□□ -1.82
MT-ND1P03886 RNA5SP309-201ENST00000516670 106 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.7□□□□□ -1.82
MT-ND1P03886 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.7□□□□□ -1.82
MT-ND1P03886 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MT-ND1P03886 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.7□□□□□ -1.82
MT-ND1P03886 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.7□□□□□ -1.82
MT-ND1P03886 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.7□□□□□ -1.82
MT-ND1P03886 AC087897.1-201ENST00000550134 156 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 MTCYBP28-201ENST00000566728 1132 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AL158211.1-201ENST00000566763 763 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AC023824.3-201ENST00000569003 562 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 MIR4504-201ENST00000577413 92 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 MIR5096-201ENST00000583713 70 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 VN1R87P-201ENST00000596706 487 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.7□□□□□ -1.82
MT-ND1P03886 AL160237.3-201ENST00000604114 1013 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AC073387.2-201ENST00000604797 784 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AC110741.2-201ENST00000605278 268 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.7□□□□□ -1.82
MT-ND1P03886 AL157392.4-201ENST00000609756 345 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 MIR7151-201ENST00000617477 60 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
MT-ND1P03886 AC104985.3-201ENST00000623479 597 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.7□□□□□ -1.82
MT-ND1P03886 AC090337.1-201ENST00000579651 2074 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
MT-ND1P03886 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
MT-ND1P03886 HSPA8P1-201ENST00000425843 1833 ntBASIC3.7□□□□□ -1.82
MT-ND1P03886 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
MT-ND1P03886 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
MT-ND1P03886 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
MT-ND1P03886 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
MT-ND1P03886 CR381670.1-201ENST00000624291 1693 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.69□□□□□ -1.82
MT-ND1P03886 AC007685.1-201ENST00000329806 452 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 MIR423-201ENST00000362201 94 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 RNU6-1243P-201ENST00000364028 107 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 MIR1250-201ENST00000408098 113 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC069218.2-201ENST00000411665 344 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 TAF13P2-201ENST00000416876 286 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AL449283.1-202ENST00000418249 604 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.69□□□□□ -1.82
MT-ND1P03886 CYP4F29P-201ENST00000420685 446 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.69□□□□□ -1.82
MT-ND1P03886 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.69□□□□□ -1.82
MT-ND1P03886 AC245028.1-201ENST00000423259 256 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.69□□□□□ -1.82
MT-ND1P03886 AL365396.1-201ENST00000430854 671 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.69□□□□□ -1.82
MT-ND1P03886 HMGB1P37-201ENST00000439613 609 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.69□□□□□ -1.82
MT-ND1P03886 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.69□□□□□ -1.82
MT-ND1P03886 CDC42P1-201ENST00000456658 548 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 RPS29P33-201ENST00000456717 146 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.69□□□□□ -1.82
MT-ND1P03886 DUXAP8-207ENST00000456786 622 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.69□□□□□ -1.82
MT-ND1P03886 AC092045.1-201ENST00000495716 1231 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC020593.1-201ENST00000507399 299 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC108475.1-201ENST00000507880 950 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC113420.1-201ENST00000507903 571 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC093840.1-201ENST00000511599 336 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC016065.2-201ENST00000514530 444 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.69□□□□□ -1.82
MT-ND1P03886 PRELID3BP4-201ENST00000515476 571 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 HIGD1AP3-201ENST00000515857 278 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.69□□□□□ -1.82
MT-ND1P03886 CBX3P5-201ENST00000552017 521 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AL133457.1-201ENST00000564251 987 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 MTCO2P2-201ENST00000591258 225 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 YWHAQP7-201ENST00000603536 658 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC007566.2-201ENST00000603642 413 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 BNIP3P4-201ENST00000604946 565 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AL049634.3-201ENST00000604968 457 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 DUXAP10-204ENST00000612052 616 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 uc_338.32-201ENST00000615087 172 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 AC114781.5-201ENST00000615297 108 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
MT-ND1P03886 AC091905.1-201ENST00000624400 311 ntBASIC3.69□□□□□ -1.82
MT-ND1P03886 BX649567.1-201ENST00000642071 1134 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms