Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.04□□□□□ -1.76
CHRNA1P02708 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHRNA1P02708 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CHRNA1P02708 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CHRNA1P02708 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.04□□□□□ -1.76
CHRNA1P02708 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA1P02708 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA1P02708 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA1P02708 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA1P02708 AL365440.1-201ENST00000436135 2167 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AC090337.1-201ENST00000579651 2074 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CHRNA1P02708 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CHRNA1P02708 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.03□□□□□ -1.76
CHRNA1P02708 MIR483-201ENST00000385070 76 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA1P02708 RPS7P15-201ENST00000415804 584 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AC008280.1-201ENST00000418851 412 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA1P02708 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.03□□□□□ -1.76
CHRNA1P02708 USP9YP7-201ENST00000436723 430 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA1P02708 AC006480.1-201ENST00000449887 378 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 USP9YP32-201ENST00000452432 430 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 RPS4XP10-201ENST00000465034 731 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.03□□□□□ -1.76
CHRNA1P02708 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA1P02708 SNX5P1-201ENST00000505757 1041 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA1P02708 SNORA74D-201ENST00000516404 141 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 IGKV2-23-201ENST00000518729 323 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.03□□□□□ -1.76
CHRNA1P02708 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.03□□□□□ -1.76
CHRNA1P02708 AP003168.1-201ENST00000530091 307 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.03□□□□□ -1.76
CHRNA1P02708 AC008011.1-201ENST00000545989 227 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AGGF1P8-201ENST00000562979 1000 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AC090751.1-201ENST00000566966 267 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.03□□□□□ -1.76
CHRNA1P02708 AL031985.2-201ENST00000600955 480 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AP003117.1-201ENST00000602771 554 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 HMGB1P50-201ENST00000605814 607 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 AP001033.2-201ENST00000609701 1003 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 FRG1DP-201ENST00000635586 771 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.03□□□□□ -1.76
CHRNA1P02708 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.03□□□□□ -1.76
CHRNA1P02708 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA1P02708 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA1P02708 SAGE2P-201ENST00000420011 2126 ntBASIC4.03□□□□□ -1.76
CHRNA1P02708 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CHRNA1P02708 MTND5P11-201ENST00000511037 1812 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 USP8P1-201ENST00000494673 3183 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.02□□□□□ -1.77
CHRNA1P02708 RNA5SP267-201ENST00000364893 126 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CHRNA1P02708 MIR1303-201ENST00000408625 86 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 MTATP6P19-201ENST00000413797 659 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.02□□□□□ -1.77
CHRNA1P02708 AC091390.3-201ENST00000426478 338 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.02□□□□□ -1.77
CHRNA1P02708 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.02□□□□□ -1.77
CHRNA1P02708 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.02□□□□□ -1.77
CHRNA1P02708 HMGB1P16-201ENST00000447155 540 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.02□□□□□ -1.77
CHRNA1P02708 RPL30P11-201ENST00000495304 339 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.02□□□□□ -1.77
CHRNA1P02708 MTND2P31-201ENST00000512602 616 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 SNORA70.18-201ENST00000516696 98 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 COX6B1P6-201ENST00000522347 255 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.02□□□□□ -1.77
CHRNA1P02708 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.02□□□□□ -1.77
CHRNA1P02708 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.02□□□□□ -1.77
CHRNA1P02708 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.02□□□□□ -1.77
CHRNA1P02708 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.02□□□□□ -1.77
CHRNA1P02708 AC020914.4-201ENST00000597690 277 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.02□□□□□ -1.77
CHRNA1P02708 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.02□□□□□ -1.77
CHRNA1P02708 AC083865.1-201ENST00000636634 831 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.02□□□□□ -1.77
CHRNA1P02708 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
CHRNA1P02708 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA1P02708 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA1P02708 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
CHRNA1P02708 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.02□□□□□ -1.77
CHRNA1P02708 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA1P02708 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHRNA1P02708 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CHRNA1P02708 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.02□□□□□ -1.77
CHRNA1P02708 IPO8P1-201ENST00000455509 3109 ntBASIC4.01□□□□□ -1.77
CHRNA1P02708 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHRNA1P02708 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
CHRNA1P02708 AC027287.1-201ENST00000553115 1453 ntBASIC4.01□□□□□ -1.77
CHRNA1P02708 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHRNA1P02708 SNORD6-201ENST00000365444 73 ntBASIC4.01□□□□□ -1.77
CHRNA1P02708 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.01□□□□□ -1.77
CHRNA1P02708 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.01□□□□□ -1.77
CHRNA1P02708 ELOCP6-201ENST00000429066 328 ntBASIC4.01□□□□□ -1.77
CHRNA1P02708 AC096638.2-201ENST00000434965 711 ntBASIC4.01□□□□□ -1.77
CHRNA1P02708 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHRNA1P02708 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms