Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 BDH2P1-201ENST00000602288 736 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 AL365503.1-201ENST00000605247 905 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 AL162574.2-201ENST00000614618 657 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.8□□□□□ -1.8
COL1A1P02452 MIR622-201ENST00000638396 96 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 AC011503.2-201ENST00000594230 1500 ntBASIC3.8□□□□□ -1.8
COL1A1P02452 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL1A1P02452 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL1A1P02452 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.8□□□□□ -1.8
COL1A1P02452 MIR184-201ENST00000384962 84 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.79□□□□□ -1.8
COL1A1P02452 AC234781.4-201ENST00000419384 244 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.79□□□□□ -1.8
COL1A1P02452 CST9LP2-201ENST00000437612 320 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.79□□□□□ -1.8
COL1A1P02452 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.79□□□□□ -1.8
COL1A1P02452 RPL37P4-201ENST00000448908 268 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 AC004924.1-201ENST00000480160 781 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.79□□□□□ -1.8
COL1A1P02452 RNA5SP356-201ENST00000515972 94 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 AC027309.2-201ENST00000520566 192 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 AC087276.1-201ENST00000529659 480 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL1A1P02452 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.79□□□□□ -1.8
COL1A1P02452 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.79□□□□□ -1.8
COL1A1P02452 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.79□□□□□ -1.8
COL1A1P02452 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.79□□□□□ -1.8
COL1A1P02452 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL1A1P02452 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.79□□□□□ -1.8
COL1A1P02452 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL1A1P02452 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL1A1P02452 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COL1A1P02452 SNORA79B-201ENST00000410557 148 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 RPL7P8-201ENST00000411964 730 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 RAC1P3-201ENST00000416129 580 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 RPS12P5-201ENST00000423449 371 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 HMGB3P11-201ENST00000440127 604 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 AL589765.3-201ENST00000446084 462 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 Z99127.3-201ENST00000448158 395 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.79□□□□□ -1.8
COL1A1P02452 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.79□□□□□ -1.8
COL1A1P02452 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.79□□□□□ -1.8
COL1A1P02452 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.79□□□□□ -1.8
COL1A1P02452 AC136601.2-201ENST00000604356 474 ntBASIC3.79□□□□□ -1.8
COL1A1P02452 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.79□□□□□ -1.8
COL1A1P02452 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.78□□□□□ -1.8
COL1A1P02452 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL1A1P02452 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COL1A1P02452 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL1A1P02452 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.78□□□□□ -1.8
COL1A1P02452 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.78□□□□□ -1.8
COL1A1P02452 RFPL4AP5-201ENST00000514977 504 ntBASIC3.78□□□□□ -1.8
COL1A1P02452 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.78□□□□□ -1.8
COL1A1P02452 AC008126.1-201ENST00000549019 480 ntBASIC3.78□□□□□ -1.8
COL1A1P02452 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.78□□□□□ -1.8
COL1A1P02452 AC006840.1-201ENST00000623069 542 ntBASIC3.78□□□□□ -1.8
COL1A1P02452 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.78□□□□□ -1.8
COL1A1P02452 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
COL1A1P02452 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL1A1P02452 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL1A1P02452 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL1A1P02452 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.77□□□□□ -1.81
COL1A1P02452 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL1A1P02452 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.77□□□□□ -1.81
COL1A1P02452 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.77□□□□□ -1.81
COL1A1P02452 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
COL1A1P02452 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.77□□□□□ -1.81
COL1A1P02452 RNU6-729P-201ENST00000384399 107 ntBASIC3.77□□□□□ -1.81
COL1A1P02452 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.77□□□□□ -1.81
COL1A1P02452 AL138878.1-201ENST00000405131 347 ntBASIC3.77□□□□□ -1.81
COL1A1P02452 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL1A1P02452 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.77□□□□□ -1.81
COL1A1P02452 AL513175.1-201ENST00000431492 780 ntBASIC3.77□□□□□ -1.81
COL1A1P02452 AC011242.1-201ENST00000433596 1158 ntBASIC3.77□□□□□ -1.81
COL1A1P02452 PTP4A1P3-201ENST00000433661 420 ntBASIC3.77□□□□□ -1.81
COL1A1P02452 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.77□□□□□ -1.81
COL1A1P02452 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.77□□□□□ -1.81
COL1A1P02452 KC877373.1-201ENST00000479066 408 ntBASIC3.77□□□□□ -1.81
COL1A1P02452 AC091826.1-201ENST00000514065 313 ntBASIC3.77□□□□□ -1.81
COL1A1P02452 RPL12P22-201ENST00000519073 490 ntBASIC3.77□□□□□ -1.81
COL1A1P02452 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.77□□□□□ -1.81
COL1A1P02452 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.77□□□□□ -1.81
COL1A1P02452 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.77□□□□□ -1.81
COL1A1P02452 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.77□□□□□ -1.81
COL1A1P02452 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.77□□□□□ -1.81
COL1A1P02452 U7.8-201ENST00000619968 63 ntBASIC3.77□□□□□ -1.81
COL1A1P02452 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.77□□□□□ -1.81
COL1A1P02452 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL1A1P02452 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
COL1A1P02452 AL451142.2-201ENST00000429076 2090 ntBASIC3.77□□□□□ -1.81
COL1A1P02452 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.77□□□□□ -1.81
COL1A1P02452 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
COL1A1P02452 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
COL1A1P02452 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
COL1A1P02452 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL1A1P02452 SPATA2P1-201ENST00000431223 2055 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 ARF4P3-201ENST00000397387 509 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 OOSP1P1-201ENST00000423265 274 ntBASIC3.76□□□□□ -1.81
COL1A1P02452 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.76□□□□□ -1.81
COL1A1P02452 AC004801.2-202ENST00000463559 283 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms