Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 SNORA56-201ENST00000383966 129 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 RNU6-413P-201ENST00000384115 107 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 SNORA70F-201ENST00000384142 135 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 RNY3P9-201ENST00000384727 106 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 ERHP2-201ENST00000402323 299 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CLPTM1O96005 RPL23AP26-201ENST00000412728 464 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC107081.1-201ENST00000414975 361 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 PTP4A1P5-201ENST00000420305 455 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.96□□□□□ -1.78
CLPTM1O96005 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.96□□□□□ -1.78
CLPTM1O96005 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.96□□□□□ -1.78
CLPTM1O96005 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 MRPL35P4-201ENST00000453682 566 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 RAD23BP3-201ENST00000454157 1152 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.96□□□□□ -1.78
CLPTM1O96005 SNX5P1-201ENST00000505757 1041 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 AC034244.1-201ENST00000507687 207 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.96□□□□□ -1.78
CLPTM1O96005 USP9YP5-201ENST00000511770 630 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 Vault.1-201ENST00000516474 102 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC010306.1-201ENST00000523223 1117 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 AP001781.1-201ENST00000530977 207 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.96□□□□□ -1.78
CLPTM1O96005 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC067852.4-201ENST00000590314 478 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.96□□□□□ -1.78
CLPTM1O96005 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC244505.7-201ENST00000599675 272 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 AL133338.2-201ENST00000604292 736 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.96□□□□□ -1.78
CLPTM1O96005 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.96□□□□□ -1.78
CLPTM1O96005 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC006042.3-201ENST00000454684 1469 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLPTM1O96005 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.96□□□□□ -1.78
CLPTM1O96005 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLPTM1O96005 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CLPTM1O96005 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLPTM1O96005 AC025031.4-201ENST00000621248 3271 ntBASIC3.96□□□□□ -1.78
CLPTM1O96005 DHX40P1-201ENST00000588725 1412 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLPTM1O96005 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLPTM1O96005 NOL8P1-201ENST00000508336 3529 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLPTM1O96005 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLPTM1O96005 OR4K15-201ENST00000305051 1216 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLPTM1O96005 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLPTM1O96005 RNU1-18P-201ENST00000363062 164 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 RNU6-707P-201ENST00000364647 95 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLPTM1O96005 RNA5SP397-201ENST00000391323 118 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AC119751.3-201ENST00000399720 670 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.95□□□□□ -1.78
CLPTM1O96005 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLPTM1O96005 AP001324.1-201ENST00000428553 399 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.95□□□□□ -1.78
CLPTM1O96005 VDAC1P6-201ENST00000430062 855 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AL031663.1-201ENST00000437445 219 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 UBE2V1P3-201ENST00000439651 417 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 UBE2V1P5-201ENST00000440070 405 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 RPS7P5-201ENST00000441482 581 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.95□□□□□ -1.78
CLPTM1O96005 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.95□□□□□ -1.78
CLPTM1O96005 MRPL42P4-201ENST00000453267 443 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.95□□□□□ -1.78
CLPTM1O96005 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.95□□□□□ -1.78
CLPTM1O96005 NECAP1P2-201ENST00000455668 727 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.95□□□□□ -1.78
CLPTM1O96005 HMGN2P7-201ENST00000456186 273 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AP000873.1-201ENST00000463987 400 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.95□□□□□ -1.78
CLPTM1O96005 RPL31P61-201ENST00000496160 376 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 IGBP1P5-201ENST00000507524 1000 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AC111000.3-201ENST00000508057 576 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AC113347.3-201ENST00000509113 148 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.95□□□□□ -1.78
CLPTM1O96005 RN7SKP92-201ENST00000517266 244 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.95□□□□□ -1.78
CLPTM1O96005 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLPTM1O96005 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.95□□□□□ -1.78
CLPTM1O96005 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.95□□□□□ -1.78
CLPTM1O96005 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.95□□□□□ -1.78
CLPTM1O96005 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.95□□□□□ -1.78
CLPTM1O96005 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms