Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 CEP170P1-201ENST00000502249 4587 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE4BO95155 RNU6ATAC-201ENST00000408749 126 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 MTATP6P11-201ENST00000428071 670 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 HMGB3P5-201ENST00000428894 612 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 AC074367.1-201ENST00000438685 1125 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.08□□□□□ -1.76
UBE4BO95155 RPL7P55-201ENST00000450522 746 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE4BO95155 RPL21P103-201ENST00000479921 488 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 AC073522.1-201ENST00000483312 377 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE4BO95155 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UBE4BO95155 NPM1P41-201ENST00000512920 831 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE4BO95155 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.08□□□□□ -1.76
UBE4BO95155 AC135001.1-201ENST00000544546 283 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 AC083899.3-201ENST00000603413 594 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 LLPHP1-201ENST00000603571 367 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 AC113194.1-201ENST00000606037 500 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.08□□□□□ -1.76
UBE4BO95155 AC105429.2-201ENST00000610567 517 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 AC018926.3-201ENST00000618841 406 ntBASIC4.08□□□□□ -1.76
UBE4BO95155 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE4BO95155 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE4BO95155 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.08□□□□□ -1.76
UBE4BO95155 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBE4BO95155 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.07□□□□□ -1.76
UBE4BO95155 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
UBE4BO95155 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBE4BO95155 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
UBE4BO95155 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBE4BO95155 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBE4BO95155 PRRC2CP1-201ENST00000404428 159 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.07□□□□□ -1.76
UBE4BO95155 SNORA57.3-201ENST00000411095 141 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 NUP35P2-201ENST00000416748 943 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.07□□□□□ -1.76
UBE4BO95155 AL139247.1-201ENST00000422768 325 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 RPL7P4-203ENST00000430239 730 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 MTCO1P43-201ENST00000431831 488 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 AC092170.1-201ENST00000440211 356 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 RRM2P4-201ENST00000441721 562 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 AC004865.1-201ENST00000442276 1003 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
UBE4BO95155 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.07□□□□□ -1.76
UBE4BO95155 AP000926.1-201ENST00000479573 241 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 GAPDHP36-201ENST00000480688 918 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.07□□□□□ -1.76
UBE4BO95155 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.07□□□□□ -1.76
UBE4BO95155 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.07□□□□□ -1.76
UBE4BO95155 AC018797.3-201ENST00000513388 1241 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 AC093853.1-201ENST00000515689 483 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.07□□□□□ -1.76
UBE4BO95155 AC106734.1-201ENST00000568646 663 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 AC017100.2-201ENST00000584628 355 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 AC096586.1-201ENST00000610267 561 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 AL359535.1-201ENST00000612100 1087 ntBASIC4.07□□□□□ -1.76
UBE4BO95155 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.07□□□□□ -1.76
UBE4BO95155 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBE4BO95155 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBE4BO95155 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBE4BO95155 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.07□□□□□ -1.76
UBE4BO95155 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBE4BO95155 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.06□□□□□ -1.76
UBE4BO95155 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBE4BO95155 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBE4BO95155 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBE4BO95155 FAM35DP-201ENST00000323387 2712 ntBASIC4.06□□□□□ -1.76
UBE4BO95155 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
UBE4BO95155 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
UBE4BO95155 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBE4BO95155 RNA5SP239-201ENST00000410218 129 ntBASIC4.06□□□□□ -1.76
UBE4BO95155 RNU4-27P-201ENST00000410889 139 ntBASIC4.06□□□□□ -1.76
UBE4BO95155 AMD1P2-201ENST00000412936 992 ntBASIC4.06□□□□□ -1.76
UBE4BO95155 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.06□□□□□ -1.76
UBE4BO95155 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBE4BO95155 OR4F13P-201ENST00000428478 931 ntBASIC4.06□□□□□ -1.76
UBE4BO95155 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE4BO95155 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.06□□□□□ -1.76
UBE4BO95155 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE4BO95155 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.06□□□□□ -1.76
UBE4BO95155 snoU13.24-201ENST00000458998 104 ntBASIC4.06□□□□□ -1.76
UBE4BO95155 RPL37P6-202ENST00000464216 403 ntBASIC4.06□□□□□ -1.76
UBE4BO95155 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBE4BO95155 RN7SKP234-201ENST00000517173 224 ntBASIC4.06□□□□□ -1.76
UBE4BO95155 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.06□□□□□ -1.76
UBE4BO95155 AL121766.1-201ENST00000547436 487 ntBASIC4.06□□□□□ -1.76
UBE4BO95155 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.06□□□□□ -1.76
UBE4BO95155 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.06□□□□□ -1.76
UBE4BO95155 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.06□□□□□ -1.76
UBE4BO95155 AC095057.3-201ENST00000567102 1157 ntBASIC4.06□□□□□ -1.76
UBE4BO95155 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.06□□□□□ -1.76
UBE4BO95155 AL049634.3-201ENST00000604968 457 ntBASIC4.06□□□□□ -1.76
UBE4BO95155 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE4BO95155 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.06□□□□□ -1.76
UBE4BO95155 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBE4BO95155 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBE4BO95155 MFSD8-213ENST00000641134 1327 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms