Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC006077.1-201ENST00000604746 343 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 SNORA51-201ENST00000606420 132 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.44□□□□□ -1.86
SEMA3DO95025 SNORA50A-202ENST00000629536 136 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.44□□□□□ -1.86
SEMA3DO95025 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SEMA3DO95025 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
SEMA3DO95025 AL672296.1-201ENST00000427780 2158 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SEMA3DO95025 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SEMA3DO95025 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SEMA3DO95025 MFSD8-233ENST00000641482 4860 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SEMA3DO95025 RNU6-40P-201ENST00000384254 107 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 RNU6-185P-201ENST00000384421 107 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SEMA3DO95025 Z86062.1-201ENST00000406773 777 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 AC010385.1-201ENST00000412374 256 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SEMA3DO95025 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.43□□□□□ -1.86
SEMA3DO95025 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.43□□□□□ -1.86
SEMA3DO95025 MTND2P21-201ENST00000436242 1042 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.43□□□□□ -1.86
SEMA3DO95025 AC114878.1-201ENST00000441166 358 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 RPS3AP46-201ENST00000448352 682 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 HMGB1P26-201ENST00000452520 628 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 RN7SL594P-201ENST00000470590 287 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 RPS3AP50-201ENST00000487064 803 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 RNU2-27P-201ENST00000516185 142 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 RN7SKP60-201ENST00000516985 239 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 NDUFB9P3-201ENST00000521269 501 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.43□□□□□ -1.86
SEMA3DO95025 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.43□□□□□ -1.86
SEMA3DO95025 AL139174.1-201ENST00000531489 886 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SEMA3DO95025 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.43□□□□□ -1.86
SEMA3DO95025 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.43□□□□□ -1.86
SEMA3DO95025 AC084824.1-201ENST00000550917 1005 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.43□□□□□ -1.86
SEMA3DO95025 AP003117.1-201ENST00000602771 554 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.43□□□□□ -1.86
SEMA3DO95025 AC239803.2-201ENST00000610161 430 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 AC099778.2-201ENST00000610904 211 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 AP004607.9-201ENST00000618202 316 ntBASIC3.43□□□□□ -1.86
SEMA3DO95025 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.43□□□□□ -1.86
SEMA3DO95025 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SEMA3DO95025 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SEMA3DO95025 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEMA3DO95025 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SEMA3DO95025 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEMA3DO95025 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
SEMA3DO95025 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.42□□□□□ -1.86
SEMA3DO95025 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.42□□□□□ -1.86
SEMA3DO95025 RPL31P12-201ENST00000422587 358 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.42□□□□□ -1.86
SEMA3DO95025 AL160175.1-201ENST00000428124 247 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SEMA3DO95025 AC074367.1-201ENST00000438685 1125 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.42□□□□□ -1.86
SEMA3DO95025 NOTCH2P1-201ENST00000443481 624 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SEMA3DO95025 SNORD105B-201ENST00000458770 79 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AC146507.1-201ENST00000468335 354 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 TRBV8-2-201ENST00000475637 270 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 RPL23AP44-201ENST00000482216 473 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.42□□□□□ -1.86
SEMA3DO95025 HMGN1P11-201ENST00000508668 303 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AC108157.1-201ENST00000510511 539 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 PTGES3P3-201ENST00000511479 482 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.42□□□□□ -1.86
SEMA3DO95025 AC010265.1-201ENST00000513509 211 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 RPL12P22-201ENST00000519073 490 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AP006245.1-201ENST00000522549 120 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.42□□□□□ -1.86
SEMA3DO95025 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SEMA3DO95025 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SEMA3DO95025 NOP56P3-201ENST00000549457 385 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AC010735.1-201ENST00000567305 1026 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.42□□□□□ -1.86
SEMA3DO95025 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.42□□□□□ -1.86
SEMA3DO95025 AC010928.3-201ENST00000587712 541 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AC020914.6-201ENST00000594327 272 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AC011468.4-201ENST00000603942 409 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AC079791.1-201ENST00000605356 973 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AL391497.1-201ENST00000608671 547 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.42□□□□□ -1.86
SEMA3DO95025 AC092184.1-201ENST00000625042 715 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.42□□□□□ -1.86
SEMA3DO95025 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEMA3DO95025 AC118273.1-201ENST00000525324 3006 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 AL157700.1-201ENST00000561973 1432 ntBASIC3.42□□□□□ -1.86
SEMA3DO95025 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEMA3DO95025 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.42□□□□□ -1.86
SEMA3DO95025 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEMA3DO95025 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEMA3DO95025 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SEMA3DO95025 AC007256.1-201ENST00000392253 2765 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEMA3DO95025 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms