Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS4BO75351 RNA5SP216-201ENST00000516111 123 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AC012339.2-201ENST00000523996 453 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS4BO75351 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS4BO75351 SERPINE4P-201ENST00000554978 281 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS4BO75351 AC090515.3-201ENST00000560431 315 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 SULT1C2P1-202ENST00000562418 459 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS4BO75351 AP001004.1-201ENST00000582468 324 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 AL049794.2-201ENST00000616301 365 ntBASIC4.82□□□□□ -1.64
VPS4BO75351 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS4BO75351 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4BO75351 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VPS4BO75351 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
VPS4BO75351 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4BO75351 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4BO75351 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS4BO75351 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS4BO75351 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4BO75351 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4BO75351 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4BO75351 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4BO75351 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4BO75351 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VPS4BO75351 FGF7P2-201ENST00000332473 296 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4BO75351 Y_RNA.3-201ENST00000362331 103 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 RNU6-501P-201ENST00000364072 100 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 Y_RNA.359-201ENST00000365498 102 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VPS4BO75351 RNU6-398P-201ENST00000384143 109 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 Y_RNA.517-201ENST00000384551 106 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 SNORA68.2-201ENST00000391263 128 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.81□□□□□ -1.64
VPS4BO75351 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4BO75351 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
VPS4BO75351 RPL21P108-201ENST00000413857 481 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4BO75351 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS4BO75351 AC009480.2-201ENST00000422916 432 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AC093698.1-201ENST00000423843 571 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 SDCBPP2-201ENST00000424643 885 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4BO75351 AC068287.1-201ENST00000430283 295 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AL365184.2-201ENST00000431139 435 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 UBE2V1P3-201ENST00000439651 417 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 RPS26P2-201ENST00000440331 348 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4BO75351 AL354710.1-201ENST00000453641 246 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AC097484.1-201ENST00000471148 389 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4BO75351 AC104763.1-201ENST00000475274 360 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 RPS4XP15-201ENST00000489210 795 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4BO75351 ARL2BPP4-201ENST00000506854 471 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4BO75351 CDC42P4-201ENST00000510507 563 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4BO75351 RN7SKP96-201ENST00000516948 297 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4BO75351 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.81□□□□□ -1.64
VPS4BO75351 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.81□□□□□ -1.64
VPS4BO75351 OR5AN2P-201ENST00000534535 896 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4BO75351 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.81□□□□□ -1.64
VPS4BO75351 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS4BO75351 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS4BO75351 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4BO75351 AC012065.4-201ENST00000602445 679 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AC008745.1-201ENST00000604064 271 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AL031320.1-201ENST00000604177 357 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AC099842.1-201ENST00000619919 596 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS4BO75351 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.81□□□□□ -1.64
VPS4BO75351 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
VPS4BO75351 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4BO75351 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4BO75351 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
VPS4BO75351 MTCO1P23-201ENST00000415223 1526 ntBASIC4.81□□□□□ -1.64
VPS4BO75351 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.81□□□□□ -1.64
VPS4BO75351 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4BO75351 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VPS4BO75351 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS4BO75351 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS4BO75351 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 PABPC1P9-201ENST00000426076 1612 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS4BO75351 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 OR4A15-201ENST00000314706 1035 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS4BO75351 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 RN7SKP224-201ENST00000364140 325 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 RNVU1-6-201ENST00000364688 164 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 RNA5SP455-201ENST00000365190 119 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms