Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.05□□□□□ -1.76
ZIC3O60481 AC098826.1-201ENST00000433943 471 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.05□□□□□ -1.76
ZIC3O60481 USP9YP35-201ENST00000435696 412 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 TMX2P1-201ENST00000436507 708 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.05□□□□□ -1.76
ZIC3O60481 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.05□□□□□ -1.76
ZIC3O60481 RPL26P28-201ENST00000451325 435 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.05□□□□□ -1.76
ZIC3O60481 TRGVB-201ENST00000453257 471 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.05□□□□□ -1.76
ZIC3O60481 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.05□□□□□ -1.76
ZIC3O60481 TPTE2P5-203ENST00000458118 728 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 SETP11-201ENST00000473027 690 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.05□□□□□ -1.76
ZIC3O60481 RPS6P4-201ENST00000494693 758 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AC108078.3-201ENST00000502633 489 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 MTCYBP17-201ENST00000503579 789 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.05□□□□□ -1.76
ZIC3O60481 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.05□□□□□ -1.76
ZIC3O60481 RN7SKP46-201ENST00000515942 234 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 RNU6-583P-201ENST00000516012 92 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.05□□□□□ -1.76
ZIC3O60481 HIGD1AP5-201ENST00000529959 259 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.05□□□□□ -1.76
ZIC3O60481 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.05□□□□□ -1.76
ZIC3O60481 AL390726.5-202ENST00000564800 256 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.05□□□□□ -1.76
ZIC3O60481 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.05□□□□□ -1.76
ZIC3O60481 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.05□□□□□ -1.76
ZIC3O60481 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.05□□□□□ -1.76
ZIC3O60481 AC020914.6-201ENST00000594327 272 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AC090181.2-201ENST00000602975 672 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AC024560.3-201ENST00000608482 349 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AC020634.1-201ENST00000608701 549 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.05□□□□□ -1.76
ZIC3O60481 MIR6864-201ENST00000617935 70 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 MIR6891-201ENST00000618788 93 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.05□□□□□ -1.76
ZIC3O60481 AL031667.3-201ENST00000620124 655 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 AC092184.1-201ENST00000625042 715 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.05□□□□□ -1.76
ZIC3O60481 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZIC3O60481 CR381670.1-201ENST00000624291 1693 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ZIC3O60481 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ZIC3O60481 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZIC3O60481 DDX18P3-201ENST00000404856 2007 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
ZIC3O60481 AC139769.1-204ENST00000472297 1931 ntBASIC4.05□□□□□ -1.76
ZIC3O60481 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZIC3O60481 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.05□□□□□ -1.76
ZIC3O60481 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
ZIC3O60481 CYP1D1P-201ENST00000416662 1433 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ZIC3O60481 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.04□□□□□ -1.76
ZIC3O60481 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
ZIC3O60481 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZIC3O60481 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.04□□□□□ -1.76
ZIC3O60481 MAPK10-286ENST00000641208 8747 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZIC3O60481 Y_RNA.77-201ENST00000362962 107 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZIC3O60481 RNU6-1122P-201ENST00000384449 107 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.04□□□□□ -1.76
ZIC3O60481 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZIC3O60481 RNU6-920P-201ENST00000410926 92 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AC016397.1-201ENST00000412463 242 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 SNRPFP1-201ENST00000414761 252 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.04□□□□□ -1.76
ZIC3O60481 AL139095.3-201ENST00000419672 1203 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 RPL18P10-201ENST00000425606 538 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.04□□□□□ -1.76
ZIC3O60481 MTND1P20-201ENST00000430341 950 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.04□□□□□ -1.76
ZIC3O60481 NPM1P33-201ENST00000438918 872 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 RPS26P56-201ENST00000444468 240 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 MTCO1P48-201ENST00000448024 1096 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AC009961.3-201ENST00000449832 765 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 EIF4A1P11-201ENST00000451239 222 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.04□□□□□ -1.76
ZIC3O60481 MTCO3P16-201ENST00000454456 754 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.04□□□□□ -1.76
ZIC3O60481 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.04□□□□□ -1.76
ZIC3O60481 RAP1BP2-201ENST00000478270 544 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZIC3O60481 OR4G11P-201ENST00000492842 939 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AC092045.1-201ENST00000495716 1231 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 OR2A20P-203ENST00000498397 1268 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.04□□□□□ -1.76
ZIC3O60481 SNX5P1-201ENST00000505757 1041 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZIC3O60481 OR51K1P-201ENST00000510214 950 ntBASIC4.04□□□□□ -1.76
ZIC3O60481 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.04□□□□□ -1.76
ZIC3O60481 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.04□□□□□ -1.76
ZIC3O60481 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms