Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC011477.5-201ENST00000586571 259 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 PRELID3BP8-201ENST00000604148 295 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 AL359535.1-201ENST00000612100 1087 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 AL592295.2-201ENST00000612578 206 ntBASIC6.13□□□□□ -1.43
GRIN3BO60391 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.13□□□□□ -1.43
GRIN3BO60391 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.13□□□□□ -1.43
GRIN3BO60391 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
GRIN3BO60391 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.13□□□□□ -1.43
GRIN3BO60391 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC6.13□□□□□ -1.43
GRIN3BO60391 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.13□□□□□ -1.43
GRIN3BO60391 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
GRIN3BO60391 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
GRIN3BO60391 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GRIN3BO60391 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.12□□□□□ -1.43
GRIN3BO60391 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.12□□□□□ -1.43
GRIN3BO60391 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GRIN3BO60391 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
GRIN3BO60391 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
GRIN3BO60391 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
GRIN3BO60391 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
GRIN3BO60391 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GRIN3BO60391 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
GRIN3BO60391 SNRPEP3-201ENST00000338402 276 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 MIR208A-201ENST00000362287 71 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 Y_RNA.333-201ENST00000365274 102 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 Y_RNA.450-201ENST00000384198 113 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
GRIN3BO60391 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.12□□□□□ -1.43
GRIN3BO60391 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.12□□□□□ -1.43
GRIN3BO60391 AL109913.1-201ENST00000421173 514 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AC007742.1-201ENST00000425789 329 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 DYNLL1P7-201ENST00000429273 258 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.12□□□□□ -1.43
GRIN3BO60391 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GRIN3BO60391 ELOCP26-201ENST00000436067 329 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AL031663.1-201ENST00000437445 219 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AC098614.3-201ENST00000438957 440 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC6.12□□□□□ -1.43
GRIN3BO60391 RAB11AP1-201ENST00000442978 646 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 NUTF2P3-201ENST00000448540 384 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 USP9YP12-201ENST00000450481 570 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 ELOCP23-201ENST00000452014 332 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.12□□□□□ -1.43
GRIN3BO60391 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.12□□□□□ -1.43
GRIN3BO60391 AC093809.1-201ENST00000509155 340 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AC006499.2-201ENST00000513470 337 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AC114781.4-201ENST00000513707 639 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 MTND5P4-201ENST00000514978 288 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 Y_RNA.702-201ENST00000516843 96 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AC023632.4-201ENST00000517783 191 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.12□□□□□ -1.43
GRIN3BO60391 ARL2BPP5-201ENST00000523141 481 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AP002001.2-201ENST00000529025 1469 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AP001781.1-201ENST00000530977 207 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
GRIN3BO60391 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.12□□□□□ -1.43
GRIN3BO60391 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.12□□□□□ -1.43
GRIN3BO60391 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.12□□□□□ -1.43
GRIN3BO60391 AC141257.3-201ENST00000572906 215 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 MIR5697-201ENST00000578045 78 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AC069061.3-201ENST00000582254 823 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AC022916.3-201ENST00000592961 742 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC6.12□□□□□ -1.43
GRIN3BO60391 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GRIN3BO60391 AC015712.7-201ENST00000615211 635 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
GRIN3BO60391 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AC006338.1-201ENST00000618453 749 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.12□□□□□ -1.43
GRIN3BO60391 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.12□□□□□ -1.43
GRIN3BO60391 uc_338.7-201ENST00000621834 124 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.12□□□□□ -1.43
GRIN3BO60391 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.12□□□□□ -1.43
GRIN3BO60391 FAM157B-203ENST00000639350 358 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 CASC19-280ENST00000642102 1351 ntBASIC6.12□□□□□ -1.43
GRIN3BO60391 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
GRIN3BO60391 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
GRIN3BO60391 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
GRIN3BO60391 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.11□□□□□ -1.43
GRIN3BO60391 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GRIN3BO60391 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.11□□□□□ -1.43
GRIN3BO60391 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GRIN3BO60391 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GRIN3BO60391 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GRIN3BO60391 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.11□□□□□ -1.43
GRIN3BO60391 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
GRIN3BO60391 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GRIN3BO60391 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GRIN3BO60391 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
GRIN3BO60391 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
GRIN3BO60391 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms