Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.53□□□□□ -2
SSSCA1O60232 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.53□□□□□ -2
SSSCA1O60232 AC006116.7-201ENST00000590141 756 ntBASIC2.53□□□□□ -2
SSSCA1O60232 AC067852.4-201ENST00000590314 478 ntBASIC2.53□□□□□ -2
SSSCA1O60232 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.53□□□□□ -2
SSSCA1O60232 AC012119.1-201ENST00000603184 222 ntBASIC2.53□□□□□ -2
SSSCA1O60232 AC007423.1-201ENST00000605009 627 ntBASIC2.53□□□□□ -2
SSSCA1O60232 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.53□□□□□ -2
SSSCA1O60232 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.53□□□□□ -2
SSSCA1O60232 CUL4AP1-201ENST00000514750 1863 ntBASIC2.53□□□□□ -2
SSSCA1O60232 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SSSCA1O60232 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.53□□□□□ -2
SSSCA1O60232 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SSSCA1O60232 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SSSCA1O60232 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.53□□□□□ -2.01
SSSCA1O60232 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.52□□□□□ -2.01
SSSCA1O60232 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.52□□□□□ -2.01
SSSCA1O60232 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SSSCA1O60232 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.52□□□□□ -2.01
SSSCA1O60232 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SSSCA1O60232 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSSCA1O60232 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SSSCA1O60232 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.52□□□□□ -2.01
SSSCA1O60232 PRELID3BP11-201ENST00000414230 479 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.52□□□□□ -2.01
SSSCA1O60232 BX842559.1-201ENST00000419615 532 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 DPPA2P1-201ENST00000428060 556 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 AL390023.1-201ENST00000428836 262 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.52□□□□□ -2.01
SSSCA1O60232 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.52□□□□□ -2.01
SSSCA1O60232 AC108734.1-201ENST00000439549 399 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 HMGN2P21-201ENST00000447764 270 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 AC104308.1-201ENST00000454621 333 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 ARPC3P2-201ENST00000457786 533 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 NDUFA5P9-201ENST00000472609 340 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 ACTR3P3-201ENST00000480448 893 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 RN7SL633P-201ENST00000488974 297 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.52□□□□□ -2.01
SSSCA1O60232 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.52□□□□□ -2.01
SSSCA1O60232 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.52□□□□□ -2.01
SSSCA1O60232 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSSCA1O60232 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.52□□□□□ -2.01
SSSCA1O60232 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.52□□□□□ -2.01
SSSCA1O60232 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.52□□□□□ -2.01
SSSCA1O60232 AC092354.2-201ENST00000607786 514 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 AC010435.1-201ENST00000623353 1177 ntBASIC2.52□□□□□ -2.01
SSSCA1O60232 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.52□□□□□ -2.01
SSSCA1O60232 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SSSCA1O60232 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSSCA1O60232 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSSCA1O60232 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSSCA1O60232 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.51□□□□□ -2.01
SSSCA1O60232 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SSSCA1O60232 GTF2H2B-203ENST00000508065 1432 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AL161431.1-201ENST00000618966 4205 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SSSCA1O60232 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AL034403.1-201ENST00000399414 885 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 RNA5SP344-201ENST00000411081 104 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 BX323014.1-201ENST00000412876 237 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.51□□□□□ -2.01
SSSCA1O60232 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.51□□□□□ -2.01
SSSCA1O60232 NOTCH2P1-201ENST00000443481 624 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 AC069540.1-201ENST00000446320 988 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.51□□□□□ -2.01
SSSCA1O60232 RPL7P23-201ENST00000493874 747 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 AC010627.1-201ENST00000503819 1294 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.51□□□□□ -2.01
SSSCA1O60232 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AC022790.1-201ENST00000522872 204 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AC010735.1-201ENST00000567305 1026 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AC083760.1-201ENST00000589621 670 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 AC022916.3-201ENST00000592961 742 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 AC091488.1-201ENST00000604239 660 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 AC073657.2-201ENST00000605661 303 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 AC019176.2-201ENST00000611579 315 ntBASIC2.51□□□□□ -2.01
SSSCA1O60232 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SSSCA1O60232 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.51□□□□□ -2.01
SSSCA1O60232 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.51□□□□□ -2.01
SSSCA1O60232 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.51□□□□□ -2.01
SSSCA1O60232 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SSSCA1O60232 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SSSCA1O60232 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SSSCA1O60232 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSSCA1O60232 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.5□□□□□ -2.01
SSSCA1O60232 OR1S2-201ENST00000302592 978 ntBASIC2.5□□□□□ -2.01
SSSCA1O60232 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms