Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL136126.1-201ENST00000473603 402 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 AC108078.3-201ENST00000502633 489 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXN3O00409 AC016065.2-201ENST00000514530 444 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXN3O00409 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 OR4A12P-201ENST00000530847 918 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 AL389895.1-201ENST00000554127 252 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 RPL21P7-201ENST00000557463 483 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 AL133457.1-201ENST00000564251 987 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 MIR4458-201ENST00000578872 75 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXN3O00409 MAGOH2P-202ENST00000584384 429 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXN3O00409 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXN3O00409 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXN3O00409 AC018714.1-201ENST00000605028 208 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 AC124312.4-201ENST00000605533 310 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 OR2AS2P-201ENST00000606902 342 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 FAM25E-202ENST00000608562 189 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXN3O00409 AL392048.1-201ENST00000613946 534 ntBASIC4.89□□□□□ -1.63
FOXN3O00409 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXN3O00409 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
FOXN3O00409 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FOXN3O00409 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXN3O00409 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.89□□□□□ -1.63
FOXN3O00409 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXN3O00409 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXN3O00409 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXN3O00409 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXN3O00409 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
FOXN3O00409 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN3O00409 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
FOXN3O00409 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN3O00409 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN3O00409 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXN3O00409 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN3O00409 AC108467.2-201ENST00000617640 1597 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN3O00409 RNU1-20P-201ENST00000363314 162 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN3O00409 SNORD116-1-201ENST00000384335 95 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AC016769.3-201ENST00000396562 315 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 BTBD10P2-201ENST00000404779 676 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 RN7SKP167-201ENST00000411047 285 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN3O00409 VDAC1P9-201ENST00000412766 841 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 RAD23BP1-201ENST00000421404 1227 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.88□□□□□ -1.63
FOXN3O00409 NIPA2P1-201ENST00000426223 976 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN3O00409 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN3O00409 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN3O00409 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN3O00409 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN3O00409 RPL26P28-201ENST00000451325 435 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN3O00409 TRBV26-201ENST00000456572 344 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 ARPC3P2-201ENST00000457786 533 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 RPL37P6-202ENST00000464216 403 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN3O00409 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN3O00409 AC087385.1-201ENST00000475062 312 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 RPL12P20-201ENST00000475538 479 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 RN7SL817P-201ENST00000480777 288 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN3O00409 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN3O00409 KLRA1P-201ENST00000503499 986 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.88□□□□□ -1.63
FOXN3O00409 MTND4LP31-201ENST00000514859 294 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 RNA5SP497-201ENST00000516081 97 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 RNU6-150P-201ENST00000516237 95 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 RN7SKP82-201ENST00000516786 223 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 RN7SKP277-201ENST00000516895 283 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXN3O00409 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN3O00409 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXN3O00409 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXN3O00409 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN3O00409 AC135628.1-201ENST00000568867 534 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 LARP7P2-201ENST00000575306 125 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN3O00409 RPL7P50-201ENST00000600588 727 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AC090181.2-201ENST00000602975 672 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AC012557.2-201ENST00000605919 418 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AC004223.4-201ENST00000612426 332 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AC008121.2-201ENST00000614647 523 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AC009090.3-201ENST00000616553 565 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AC091953.3-201ENST00000623220 236 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 FAM157B-203ENST00000639350 358 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AL596275.2-204ENST00000641628 552 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 AL596275.2-206ENST00000641957 626 ntBASIC4.88□□□□□ -1.63
FOXN3O00409 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN3O00409 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN3O00409 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN3O00409 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.88□□□□□ -1.63
FOXN3O00409 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN3O00409 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
FOXN3O00409 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms