Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RCCD1A6NED2 AC011500.1-201ENST00000601963 469 ntBASIC6.9□□□□□ -1.3
RCCD1A6NED2 AL713866.2-201ENST00000603579 219 ntBASIC6.9□□□□□ -1.3
RCCD1A6NED2 AL138889.2-201ENST00000603883 242 ntBASIC6.9□□□□□ -1.3
RCCD1A6NED2 AL590099.1-201ENST00000615276 138 ntBASIC6.9□□□□□ -1.3
RCCD1A6NED2 AL118522.2-201ENST00000616045 615 ntBASIC6.9□□□□□ -1.3
RCCD1A6NED2 AC091903.1-201ENST00000624322 454 ntBASIC6.9□□□□□ -1.3
RCCD1A6NED2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
RCCD1A6NED2 MAPK10-287ENST00000641217 3037 ntBASIC6.9□□□□□ -1.3
RCCD1A6NED2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RCCD1A6NED2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RCCD1A6NED2 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.9□□□□□ -1.31
RCCD1A6NED2 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.9□□□□□ -1.31
RCCD1A6NED2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RCCD1A6NED2 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
RCCD1A6NED2 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
RCCD1A6NED2 AC093775.1-201ENST00000624154 1868 ntBASIC6.9□□□□□ -1.31
RCCD1A6NED2 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RCCD1A6NED2 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
RCCD1A6NED2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RCCD1A6NED2 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RCCD1A6NED2 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 RNA5SP321-201ENST00000362722 111 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 RNA5SP152-201ENST00000365184 110 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 RPL18AP14-201ENST00000417685 526 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 SPATA20P1-201ENST00000423089 438 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 RPL12P34-201ENST00000424532 479 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 AC234779.1-201ENST00000425910 285 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 AL022324.2-201ENST00000434827 780 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 AL353597.2-202ENST00000434901 373 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 RN7SL492P-201ENST00000460700 295 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 AC022447.4-201ENST00000504053 364 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 MRPL57P6-201ENST00000506570 309 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 RNU6-111P-201ENST00000517179 105 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 SNORA81.3-201ENST00000517283 198 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 IGKV2D-38-201ENST00000518423 240 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 IGHV1-14-201ENST00000523391 241 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 RPA2P3-201ENST00000533268 770 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 FAM30C-201ENST00000561158 410 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 MIR378C-201ENST00000578683 81 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 AC008521.1-201ENST00000587471 187 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 AC091133.5-201ENST00000603088 301 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 HMGN2P28-201ENST00000606102 262 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 SNORD96A-201ENST00000606577 79 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RCCD1A6NED2 MRPL57P3-201ENST00000619218 176 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 MIR665-201ENST00000635949 72 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 AL512353.3-201ENST00000417517 1326 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 CUBNP3-201ENST00000457461 1784 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 AC009313.2-201ENST00000417893 1941 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RCCD1A6NED2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 PWAR1-201ENST00000624188 2414 ntBASIC6.89□□□□□ -1.31
RCCD1A6NED2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RCCD1A6NED2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RCCD1A6NED2 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RCCD1A6NED2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
RCCD1A6NED2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RCCD1A6NED2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.88□□□□□ -1.31
RCCD1A6NED2 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
RCCD1A6NED2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.88□□□□□ -1.31
RCCD1A6NED2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
RCCD1A6NED2 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RCCD1A6NED2 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.88□□□□□ -1.31
RCCD1A6NED2 EXOC5P1-201ENST00000510543 1969 ntBASIC6.88□□□□□ -1.31
RCCD1A6NED2 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
RCCD1A6NED2 CDC27P2-201ENST00000425026 1922 ntBASIC6.88□□□□□ -1.31
RCCD1A6NED2 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RCCD1A6NED2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.88□□□□□ -1.31
RCCD1A6NED2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RCCD1A6NED2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RCCD1A6NED2 GABPAP-201ENST00000419271 1356 ntBASIC6.88□□□□□ -1.31
RCCD1A6NED2 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RCCD1A6NED2 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RCCD1A6NED2 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RCCD1A6NED2 RNU6-393P-201ENST00000384475 107 ntBASIC6.88□□□□□ -1.31
RCCD1A6NED2 MIR137-201ENST00000385223 102 ntBASIC6.88□□□□□ -1.31
RCCD1A6NED2 SNORA16.2-201ENST00000390991 127 ntBASIC6.88□□□□□ -1.31
RCCD1A6NED2 RNU1-56P-201ENST00000391303 164 ntBASIC6.88□□□□□ -1.31
RCCD1A6NED2 AC004386.1-201ENST00000393214 761 ntBASIC6.88□□□□□ -1.31
RCCD1A6NED2 RNA5SP107-201ENST00000411358 122 ntBASIC6.88□□□□□ -1.31
RCCD1A6NED2 AC069218.2-201ENST00000411665 344 ntBASIC6.88□□□□□ -1.31
RCCD1A6NED2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.88□□□□□ -1.31
RCCD1A6NED2 MTCO3P19-201ENST00000415864 321 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms