Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AL121594.4-201ENST00000556211 1196 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 ZNF92P3-201ENST00000596594 954 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC139769.3-201ENST00000618383 175 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 MTND5P11-201ENST00000511037 1812 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 MTND4P26-201ENST00000415971 1359 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 AC096656.1-201ENST00000623826 1364 ntBASIC3.74□□□□□ -1.81
SMIM28A0A1B0GU29 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 RPS24P12-201ENST00000402084 394 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 ATP5F1P6-201ENST00000402768 767 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 SNORA11.1-201ENST00000408133 129 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 RN7SKP111-201ENST00000410349 271 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 RN7SKP56-201ENST00000410513 331 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AL158050.1-201ENST00000416077 457 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AL158156.1-201ENST00000422509 473 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AL121882.1-201ENST00000422893 417 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AL138785.1-201ENST00000425821 331 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 NPM1P24-201ENST00000428039 894 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 MED6P1-201ENST00000439659 713 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 RPS27P5-201ENST00000444247 244 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AC093663.1-201ENST00000497190 394 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AC027338.1-201ENST00000514840 825 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 OSBPL9P3-201ENST00000534523 595 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AC011611.1-201ENST00000552179 197 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 DUXAP6-201ENST00000553858 601 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AL136520.1-202ENST00000555494 763 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AL031985.2-201ENST00000600955 480 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AC007390.2-201ENST00000606229 3803 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AC024023.1-201ENST00000624530 922 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AC116563.2-201ENST00000624751 535 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 MIR6715B-201ENST00000637172 77 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 MTND5P1-201ENST00000445440 1375 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AC017007.4-201ENST00000503353 1352 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 AC068647.1-201ENST00000489539 2265 ntBASIC3.73□□□□□ -1.81
SMIM28A0A1B0GU29 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 CR381670.1-201ENST00000624291 1693 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 RNU6-761P-201ENST00000384148 107 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 MIR142-201ENST00000384835 87 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 RPL31P52-201ENST00000407532 367 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 BX323014.1-201ENST00000412876 237 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC114814.2-201ENST00000419195 485 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC005189.1-201ENST00000431286 310 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 CBX1P4-201ENST00000439415 457 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 RPL7P31-201ENST00000450192 724 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC007967.1-201ENST00000455422 1159 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC078857.1-201ENST00000469870 667 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 RNU6-467P-201ENST00000517027 110 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 OR5AP1P-201ENST00000529730 940 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AP002812.4-201ENST00000532139 286 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC099489.2-201ENST00000574976 260 ntBASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.72□□□□□ -1.81
SMIM28A0A1B0GU29 MIR4512-201ENST00000583257 77 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms