Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC112191.3-201ENST00000604371 277 ntBASIC4.67□□□□□ -1.66
RLIMQ9NVW2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.67□□□□□ -1.66
RLIMQ9NVW2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.67□□□□□ -1.66
RLIMQ9NVW2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RLIMQ9NVW2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
RLIMQ9NVW2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.67□□□□□ -1.66
RLIMQ9NVW2 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.67□□□□□ -1.66
RLIMQ9NVW2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RLIMQ9NVW2 SCARNA15-201ENST00000607520 4325 ntBASIC4.67□□□□□ -1.66
RLIMQ9NVW2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RLIMQ9NVW2 AC021242.1-201ENST00000507315 2035 ntBASIC4.67□□□□□ -1.66
RLIMQ9NVW2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.67□□□□□ -1.66
RLIMQ9NVW2 AL672167.1-205ENST00000641112 3080 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 ELL2P4-201ENST00000446870 1376 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC126323.6-202ENST00000568092 3511 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 MIR1271-201ENST00000408537 86 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 RN7SKP266-201ENST00000410232 287 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 RN7SKP126-201ENST00000411143 300 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 SLC35E1P1-201ENST00000419313 864 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AL353597.2-202ENST00000434901 373 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 RPL12P18-201ENST00000437175 325 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 RPL36AP15-201ENST00000444514 266 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 EIF4A1P11-201ENST00000451239 222 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 Z82190.1-201ENST00000454534 490 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 RNA5SP103-201ENST00000459503 118 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 RPL31P50-201ENST00000471002 296 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 LARP1BP2-201ENST00000486594 519 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 RPL7P24-201ENST00000493052 752 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC022447.3-201ENST00000506865 495 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC027308.1-201ENST00000517993 110 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 TPMTP1-201ENST00000592307 737 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC011445.2-201ENST00000599274 173 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC103792.1-201ENST00000603591 919 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC068944.2-201ENST00000610373 403 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC091834.1-201ENST00000614543 472 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AP001005.3-201ENST00000622049 129 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RLIMQ9NVW2 AC012020.1-201ENST00000624541 1728 ntBASIC4.66□□□□□ -1.66
RLIMQ9NVW2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RLIMQ9NVW2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RLIMQ9NVW2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RLIMQ9NVW2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RLIMQ9NVW2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RLIMQ9NVW2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.65□□□□□ -1.66
RLIMQ9NVW2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.65□□□□□ -1.66
RLIMQ9NVW2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RLIMQ9NVW2 SNORA17.1-201ENST00000362945 126 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 RNU5A-6P-201ENST00000384136 116 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 RNU6-769P-201ENST00000384407 104 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 RNU6-178P-201ENST00000384631 104 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 MIR1305-201ENST00000408300 86 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.65□□□□□ -1.67
RLIMQ9NVW2 RPS15AP40-201ENST00000419621 391 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.65□□□□□ -1.67
RLIMQ9NVW2 RPL12P34-201ENST00000424532 479 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.65□□□□□ -1.67
RLIMQ9NVW2 AL445669.1-201ENST00000426743 755 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 AC109583.1-201ENST00000432156 268 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 CEACAMP1-201ENST00000434624 1035 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 RPL22P17-201ENST00000438729 315 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.65□□□□□ -1.67
RLIMQ9NVW2 RPL7P36-201ENST00000444633 681 ntBASIC4.65□□□□□ -1.67
RLIMQ9NVW2 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.65□□□□□ -1.67
RLIMQ9NVW2 SBDSP1-204ENST00000453858 737 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 451.9 ms