Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AC010618.1-201ENST00000469924 477 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 RPL5P23-201ENST00000496040 868 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 SNORA19.3-201ENST00000516165 130 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AP000790.1-201ENST00000528891 737 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AC025884.1-201ENST00000556034 378 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 RPL23AP87-202ENST00000573039 466 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 MIR3912-201ENST00000577566 105 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 SNORD39.3-201ENST00000584451 71 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AL390838.2-201ENST00000602394 274 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AC113368.1-201ENST00000603736 382 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AC012603.1-201ENST00000606424 528 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 AL136295.6-201ENST00000610486 658 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 MIR378J-201ENST00000611988 109 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 MAPK10-253ENST00000641010 4072 ntBASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.59□□□□□ -1.67
BLOC1S4Q9NUP1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
BLOC1S4Q9NUP1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.59□□□□□ -1.68
BLOC1S4Q9NUP1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.59□□□□□ -1.68
BLOC1S4Q9NUP1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
BLOC1S4Q9NUP1 AL359893.1-201ENST00000447628 1580 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 XIAPP3-201ENST00000312918 795 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC068538.1-201ENST00000376856 336 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 MT-TC-201ENST00000387405 66 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AL121972.1-201ENST00000402023 252 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 Y_RNA.625-201ENST00000411256 107 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC016397.1-201ENST00000412463 242 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 BOLA3P4-201ENST00000418151 400 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 RPL23AP38-201ENST00000423801 469 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 GTF2IP7-202ENST00000436677 309 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 MTCO1P48-201ENST00000448024 1096 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 RN7SKP116-201ENST00000516902 319 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 SCARNA1-201ENST00000517138 166 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC027309.2-201ENST00000520566 192 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 OR4A12P-201ENST00000530847 918 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC119501.1-201ENST00000603646 475 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 DPRXP5-201ENST00000604662 539 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC069545.1-201ENST00000605671 358 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC144521.1-201ENST00000607148 956 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC083809.1-201ENST00000615051 472 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 SNX18P1Y-201ENST00000616231 511 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC090246.1-201ENST00000616499 426 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AC010975.3-201ENST00000618727 978 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 C2orf27A-204ENST00000623058 969 ntBASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.58□□□□□ -1.68
BLOC1S4Q9NUP1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 RNU11-4P-201ENST00000391149 133 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 RSL24D1P1-201ENST00000404972 493 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AL136133.1-201ENST00000413694 376 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AC092634.6-201ENST00000418558 192 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 SDCBPP2-201ENST00000424643 885 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 SEPT7P5-201ENST00000434048 306 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms