Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 VN1R10P-201ENST00000447106 875 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 SLC31A1P1-201ENST00000451221 567 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC010326.1-201ENST00000462726 602 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC092757.1-201ENST00000467293 467 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 S100A11P1-201ENST00000477525 312 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 NDUFA5P12-201ENST00000503796 343 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 STMN1P2-201ENST00000508435 439 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 OR7H2P-201ENST00000513483 306 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 RNA5SP497-201ENST00000516081 97 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AP001636.2-201ENST00000525517 696 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AP000827.1-201ENST00000527814 258 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AP003461.1-201ENST00000528866 78 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AP003385.6-201ENST00000531603 374 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 ZNF321P-202ENST00000550843 495 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 RPL23AP97-201ENST00000568955 471 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 MIR4436B2-201ENST00000581415 91 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 MIR4436B1-201ENST00000583272 91 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 RN7SL52P-201ENST00000584271 284 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 BNIP3P24-201ENST00000593398 557 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 CLIC4P2-201ENST00000601934 717 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 FAM25E-202ENST00000608562 189 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC027290.2-201ENST00000623210 18662 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC104454.1-201ENST00000421341 1401 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 RNU6-157P-201ENST00000383957 107 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 SNORA70F-201ENST00000384142 135 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 MT-TC-201ENST00000387405 66 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 MIR708-201ENST00000390708 88 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 MTND4P13-201ENST00000402078 1023 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 RN7SKP106-201ENST00000410832 272 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 RN7SKP216-201ENST00000411050 312 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 TIMM9P2-201ENST00000419324 266 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC005517.2-201ENST00000424673 553 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 USP9YP9-201ENST00000429406 715 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 MTND5P25-201ENST00000430499 799 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AL356276.2-201ENST00000435919 558 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 MTCO2P20-201ENST00000437339 673 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 MTND4P6-201ENST00000438297 472 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 MTCYBP34-201ENST00000439552 670 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AL645939.1-201ENST00000453429 797 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 MTCO2P6-201ENST00000463134 685 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC083982.1-201ENST00000485679 344 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 OR5H5P-201ENST00000503164 928 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC093767.1-201ENST00000504523 156 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 HMGB1P28-201ENST00000507778 552 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 RN7SKP116-201ENST00000516902 319 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 DUXAP1-201ENST00000556632 463 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC006539.2-201ENST00000601729 572 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC083899.3-201ENST00000603413 594 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC025588.3-201ENST00000604182 274 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC069304.2-201ENST00000605154 435 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC006270.3-201ENST00000605967 1036 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AL354976.1-201ENST00000613843 387 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 AC007546.2-201ENST00000623996 360 ntBASIC4.29□□□□□ -1.72
BRF2Q9HAW0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRF2Q9HAW0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms