Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 SNORA56-201ENST00000383966 129 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 HMGB1P10-201ENST00000395823 563 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 UBE2V1P9-201ENST00000414760 368 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 AL158073.1-201ENST00000426848 1104 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 DEFB130D-201ENST00000426866 237 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 RPL12P46-201ENST00000436610 195 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 FABP5P3-201ENST00000437960 408 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 ANP32BP2-201ENST00000454525 545 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 RNU6-1231P-201ENST00000517185 103 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 AC009712.1-201ENST00000564938 316 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 AL592436.1-201ENST00000605135 558 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 AC093673.2-201ENST00000609674 331 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 AL109659.3-201ENST00000624985 950 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 MIR92A2-201ENST00000385299 75 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AL159169.1-201ENST00000421119 127 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 OSTCP5-201ENST00000425293 453 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AC092447.3-201ENST00000426027 686 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 MTCO1P53-201ENST00000441633 699 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 ELOCP13-201ENST00000443934 329 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AC068587.2-201ENST00000478386 781 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AC005912.1-201ENST00000495392 255 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AC020699.1-201ENST00000505161 445 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AP000926.4-201ENST00000527351 454 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 HNRNPCP4-201ENST00000571636 900 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 RPP40P2-201ENST00000603596 712 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AC010200.2-201ENST00000605098 235 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 AL365503.1-201ENST00000605247 905 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 RNU4-5P-201ENST00000607255 135 ntBASIC4.5□□□□□ -1.69
UPF2Q9HAU5 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UPF2Q9HAU5 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 SAGE2P-201ENST00000420011 2126 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AL445437.1-201ENST00000623157 3087 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC008173.1-201ENST00000418901 264 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 RPL17P36-201ENST00000420302 549 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 RPL7P53-201ENST00000421245 739 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 OR10R1P-201ENST00000441524 1141 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC006539.3-201ENST00000454258 129 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC098862.1-201ENST00000504991 413 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC113420.1-201ENST00000507903 571 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 RNU6-276P-201ENST00000516114 96 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 EEF1A1P37-201ENST00000522748 715 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.49□□□□□ -1.69
UPF2Q9HAU5 VN1R79P-201ENST00000593540 513 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC015726.1-201ENST00000602353 681 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AL450336.1-201ENST00000605180 586 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC011374.2-201ENST00000607135 526 ntBASIC4.49□□□□□ -1.69
UPF2Q9HAU5 AC009974.1-201ENST00000608881 455 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms