Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RNU6-878P-201ENST00000384578 110 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 Y_RNA.548-201ENST00000384656 105 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 RNU1-149P-201ENST00000390870 161 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AL121972.1-201ENST00000402023 252 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AL603766.1-201ENST00000407763 664 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 MIR320C1-201ENST00000408566 88 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 JKAMPP1-201ENST00000413804 919 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC007390.1-201ENST00000415722 356 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 ISCA1P6-201ENST00000427740 390 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 NANOGP6-201ENST00000429190 847 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC012075.1-201ENST00000436549 580 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AL163193.1-201ENST00000444895 788 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 SNRPGP6-201ENST00000451124 220 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 BTF3P5-201ENST00000457252 467 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 RPL7P6-201ENST00000480903 738 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 MTND5P5-201ENST00000503764 376 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC117522.3-201ENST00000507974 584 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC111000.3-201ENST00000508057 576 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 RNU6-1281P-201ENST00000516223 105 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 RNA5SP34-201ENST00000516887 130 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AL845331.3-202ENST00000562856 261 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 RPS3AP23-202ENST00000574601 686 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC011840.5-201ENST00000582125 771 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 PRPF19P1-201ENST00000584766 898 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 HMGN1P30-201ENST00000589286 268 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 AC211433.2-201ENST00000608433 387 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 CU639417.4-201ENST00000623928 207 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 CDRT1-208ENST00000630868 794 ntBASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
FOXP3Q9BZS1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 SOCS5P3-201ENST00000425115 1576 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 Y_RNA.142-201ENST00000363491 102 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 RNU1-146P-201ENST00000364015 165 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 FAT1P1-201ENST00000406588 507 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 SNRPEP10-201ENST00000420249 274 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC233981.1-201ENST00000423224 461 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 SDCBPP2-201ENST00000424643 885 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC023347.2-201ENST00000433994 462 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 SDCBPP1-201ENST00000440192 890 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC132479.1-201ENST00000449160 144 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AL450023.1-201ENST00000450868 751 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 MTCO1P42-201ENST00000457379 726 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 RPL23AP12-201ENST00000467573 473 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 RN7SL799P-201ENST00000475891 298 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 MTND1P3-201ENST00000484956 952 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 Y_RNA.675-201ENST00000516389 149 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 IGBP1P1-201ENST00000554337 1009 ntBASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXP3Q9BZS1 AL157394.1-201ENST00000562983 1224 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms