Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL596327.1-201ENST00000603629 213 ntBASIC4.88□□□□□ -1.63
SMOQ99835 AL133338.2-201ENST00000604292 736 ntBASIC4.88□□□□□ -1.63
SMOQ99835 Z99129.1-201ENST00000612510 255 ntBASIC4.88□□□□□ -1.63
SMOQ99835 CR392039.4-201ENST00000624968 501 ntBASIC4.88□□□□□ -1.63
SMOQ99835 AC025048.6-202ENST00000627667 438 ntBASIC4.88□□□□□ -1.63
SMOQ99835 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.88□□□□□ -1.63
SMOQ99835 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMOQ99835 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SMOQ99835 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SMOQ99835 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
SMOQ99835 BTBD10P1-201ENST00000549824 1352 ntBASIC4.88□□□□□ -1.63
SMOQ99835 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.87□□□□□ -1.63
SMOQ99835 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.87□□□□□ -1.63
SMOQ99835 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMOQ99835 AC090017.1-201ENST00000548612 1779 ntBASIC4.87□□□□□ -1.63
SMOQ99835 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMOQ99835 Y_RNA.41-201ENST00000362646 102 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.87□□□□□ -1.63
SMOQ99835 RNU6-1122P-201ENST00000384449 107 ntBASIC4.87□□□□□ -1.63
SMOQ99835 MIR659-201ENST00000384963 97 ntBASIC4.87□□□□□ -1.63
SMOQ99835 MIR92A2-201ENST00000385299 75 ntBASIC4.87□□□□□ -1.63
SMOQ99835 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMOQ99835 RPS3AP23-201ENST00000401762 784 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AL592291.1-201ENST00000403830 352 ntBASIC4.87□□□□□ -1.63
SMOQ99835 RPS4XP9-201ENST00000405151 780 ntBASIC4.87□□□□□ -1.63
SMOQ99835 MTCO3P31-201ENST00000405526 789 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AL512430.2-201ENST00000406786 339 ntBASIC4.87□□□□□ -1.63
SMOQ99835 Y_RNA.625-201ENST00000411256 107 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.87□□□□□ -1.63
SMOQ99835 AC092647.1-201ENST00000420654 287 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.87□□□□□ -1.63
SMOQ99835 AC233981.1-201ENST00000423224 461 ntBASIC4.87□□□□□ -1.63
SMOQ99835 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AC010881.1-201ENST00000433830 235 ntBASIC4.87□□□□□ -1.63
SMOQ99835 NMNAT1P2-201ENST00000435192 860 ntBASIC4.87□□□□□ -1.63
SMOQ99835 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.87□□□□□ -1.63
SMOQ99835 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.87□□□□□ -1.63
SMOQ99835 BMI1P1-201ENST00000445879 941 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AC104651.2-201ENST00000447549 528 ntBASIC4.87□□□□□ -1.63
SMOQ99835 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.87□□□□□ -1.63
SMOQ99835 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.87□□□□□ -1.63
SMOQ99835 RPL5P22-201ENST00000480199 884 ntBASIC4.87□□□□□ -1.63
SMOQ99835 RPL7AP10-201ENST00000481016 791 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.87□□□□□ -1.63
SMOQ99835 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 AL390726.5-202ENST00000564800 256 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AC017100.2-201ENST00000584628 355 ntBASIC4.87□□□□□ -1.63
SMOQ99835 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 AC012065.4-201ENST00000602445 679 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AC107214.2-201ENST00000608204 634 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AC087241.4-201ENST00000612441 480 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AP001005.3-201ENST00000622049 129 ntBASIC4.87□□□□□ -1.63
SMOQ99835 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.87□□□□□ -1.63
SMOQ99835 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SMOQ99835 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMOQ99835 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMOQ99835 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SMOQ99835 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SMOQ99835 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMOQ99835 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMOQ99835 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMOQ99835 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMOQ99835 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMOQ99835 AL391684.1-202ENST00000641293 1636 ntBASIC4.86□□□□□ -1.63
SMOQ99835 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SMOQ99835 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SMOQ99835 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SMOQ99835 AC134882.1-201ENST00000603738 1676 ntBASIC4.86□□□□□ -1.63
SMOQ99835 AL079343.1-201ENST00000572358 1771 ntBASIC4.86□□□□□ -1.63
SMOQ99835 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMOQ99835 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SMOQ99835 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
SMOQ99835 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.86□□□□□ -1.63
SMOQ99835 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMOQ99835 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SMOQ99835 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SMOQ99835 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SMOQ99835 RNU6-657P-201ENST00000383904 107 ntBASIC4.86□□□□□ -1.63
SMOQ99835 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.86□□□□□ -1.63
SMOQ99835 AC136624.1-201ENST00000400791 413 ntBASIC4.86□□□□□ -1.63
SMOQ99835 Z98745.1-201ENST00000402553 494 ntBASIC4.86□□□□□ -1.63
SMOQ99835 NCSTNP1-201ENST00000406229 144 ntBASIC4.86□□□□□ -1.63
SMOQ99835 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.86□□□□□ -1.63
SMOQ99835 AL807761.1-201ENST00000417622 171 ntBASIC4.86□□□□□ -1.63
SMOQ99835 UBTFL3-201ENST00000418934 1024 ntBASIC4.86□□□□□ -1.63
SMOQ99835 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.86□□□□□ -1.63
SMOQ99835 AL365184.2-201ENST00000431139 435 ntBASIC4.86□□□□□ -1.63
SMOQ99835 MTND1P4-201ENST00000435196 415 ntBASIC4.86□□□□□ -1.63
SMOQ99835 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms