Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SLC25A18P1-201ENST00000449385 454 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 HMGB1P4-201ENST00000455362 567 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 BX322784.1-201ENST00000455793 1077 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 RPS3AP41-201ENST00000462701 778 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 RPS23P1-201ENST00000491662 432 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 GAPDHP56-201ENST00000506031 988 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 Y_RNA.675-201ENST00000516389 149 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC022690.1-201ENST00000526681 550 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 OR8A2P-201ENST00000528631 952 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AP002748.2-201ENST00000528671 348 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 MIR3671-201ENST00000580455 88 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 MIR4436B2-201ENST00000581415 91 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 MIR4436B1-201ENST00000583272 91 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC091488.1-201ENST00000604239 660 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC087783.2-201ENST00000605070 562 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC008536.2-201ENST00000607284 349 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC024560.3-201ENST00000608482 349 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC019206.1-201ENST00000621938 425 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 CR381572.2-201ENST00000624852 397 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 MIR6863-201ENST00000636112 90 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AL034370.1-201ENST00000397254 1590 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 SDAD1P1-202ENST00000524156 2051 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC005332.5-201ENST00000591222 2919 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC099654.2-201ENST00000433031 1980 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 Y_RNA.263-201ENST00000364659 114 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 RPL23AP39-201ENST00000415533 405 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC069157.1-201ENST00000421749 137 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 FO393419.3-201ENST00000428741 282 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AL365184.2-201ENST00000431139 435 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 RPL23AP35-201ENST00000451906 501 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC091133.4-201ENST00000511142 308 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 PTGES3P3-201ENST00000511479 482 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC021006.3-201ENST00000530771 192 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 OR4C2P-201ENST00000530855 1064 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 HPRT1P3-201ENST00000539521 576 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 MIR3936-201ENST00000584304 110 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC024940.4-201ENST00000605507 246 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AL442067.2-201ENST00000614033 363 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AL049794.2-201ENST00000616301 365 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AL445264.1-201ENST00000621719 171 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AP001784.1-201ENST00000624107 428 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 AC104623.2-202ENST00000623477 4002 ntBASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDK5RAP1Q96SZ6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms