Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC008562.1-201ENST00000521763 330 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 COX6B1P6-201ENST00000522347 255 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 OR7E13P-201ENST00000526052 910 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.43□□□□□ -1.86
COL21A1Q96P44 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.43□□□□□ -1.86
COL21A1Q96P44 AC074029.1-201ENST00000552531 1044 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
COL21A1Q96P44 BNIP3P11-201ENST00000603878 563 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 AC018618.2-201ENST00000604770 446 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 AC011374.2-201ENST00000607135 526 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 AC103710.3-201ENST00000608157 948 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 OR8B1P-202ENST00000641132 1178 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
COL21A1Q96P44 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.43□□□□□ -1.86
COL21A1Q96P44 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL21A1Q96P44 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL21A1Q96P44 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL21A1Q96P44 AL021368.2-201ENST00000606125 5352 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL21A1Q96P44 AC009501.3-201ENST00000605001 1352 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 RNU6-525P-201ENST00000363685 104 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 RNU6-761P-201ENST00000384148 107 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 HNRNPDP2-201ENST00000406475 478 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 RNU6ATAC-201ENST00000408749 126 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 LINC01347-201ENST00000417964 355 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 RPL36AP36-201ENST00000418616 301 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 MTCO3P4-201ENST00000419236 787 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 CR848007.2-201ENST00000424918 787 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 AC007389.2-201ENST00000434630 306 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 RRM2P4-201ENST00000441721 562 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 NOTCH2P1-201ENST00000443481 624 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 AC097499.1-201ENST00000444277 208 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 RN7SL330P-201ENST00000469709 307 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 ACTG1P13-201ENST00000486987 1043 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 AP002812.1-201ENST00000495378 474 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 HMGN1P11-201ENST00000508668 303 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 SNORA31.13-201ENST00000516624 135 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL21A1Q96P44 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 TGIF1P1-201ENST00000558095 802 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 AL049634.3-201ENST00000604968 457 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 KATNBL1P1-201ENST00000605192 748 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 AL391497.1-201ENST00000608671 547 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 AC025016.1-201ENST00000616746 682 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL21A1Q96P44 HSPA8P19-201ENST00000505359 1517 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL21A1Q96P44 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL21A1Q96P44 MTCO1P14-201ENST00000441695 1559 ntBASIC3.42□□□□□ -1.86
COL21A1Q96P44 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL21A1Q96P44 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.42□□□□□ -1.86
COL21A1Q96P44 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 U8.11-201ENST00000384699 133 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 U8.12-201ENST00000384701 133 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 MIR554-201ENST00000384874 96 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 ATP5F1P3-201ENST00000397213 657 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 AL136116.1-201ENST00000403591 381 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 LIPT1P1-201ENST00000415870 1186 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 MTND4P24-201ENST00000424002 397 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 XKRY2-201ENST00000442362 1093 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL21A1Q96P44 MRPS31P2-201ENST00000451581 518 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 MTND3P4-201ENST00000453537 303 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC006539.3-201ENST00000454258 129 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 HMGN2P7-201ENST00000456186 273 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 U8.18-201ENST00000459285 133 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 CABYRP1-201ENST00000465493 1045 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC018635.1-201ENST00000468292 1030 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 UBE2CP3-201ENST00000502715 450 ntBASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.41□□□□□ -1.86
COL21A1Q96P44 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms