Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.42□□□□□ -1.86
LRRC58Q96CX6 AC116563.2-201ENST00000624751 535 ntBASIC3.42□□□□□ -1.86
LRRC58Q96CX6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
LRRC58Q96CX6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC58Q96CX6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
LRRC58Q96CX6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC58Q96CX6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LRRC58Q96CX6 AC006042.3-201ENST00000454684 1469 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 AC095050.2-201ENST00000510748 1458 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 U3.15-201ENST00000365398 212 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 AL353692.2-201ENST00000407054 335 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 RN7SKP159-201ENST00000410657 292 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 LINC01881-201ENST00000416103 412 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 RRM2P4-201ENST00000441721 562 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 RPL12P26-201ENST00000452430 487 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 AC091959.2-201ENST00000477363 321 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 RPS4XP22-201ENST00000480755 780 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 RN7SL323P-201ENST00000494712 295 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 FTH1P21-201ENST00000512179 511 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 DUXAP6-201ENST00000553858 601 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 AL450270.1-201ENST00000606160 391 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 U6.48-201ENST00000618523 106 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 MTND5P11-201ENST00000511037 1812 ntBASIC3.41□□□□□ -1.86
LRRC58Q96CX6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC58Q96CX6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LRRC58Q96CX6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LRRC58Q96CX6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
LRRC58Q96CX6 AC022031.1-201ENST00000585985 2593 ntBASIC3.4□□□□□ -1.86
LRRC58Q96CX6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 OR52E6-202ENST00000379946 954 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 CYCSP19-201ENST00000411715 316 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 TCEA1P4-201ENST00000415066 844 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 MTCO3P4-201ENST00000419236 787 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AL121882.1-201ENST00000422893 417 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 OR8F1P-201ENST00000425243 930 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 RPL7P2-201ENST00000427639 268 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 MTATP6P11-201ENST00000428071 670 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 HMGB3P5-201ENST00000428894 612 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AL357552.1-201ENST00000445254 415 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 SNRPGP5-201ENST00000456003 220 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 RPL37P3-201ENST00000456825 293 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 RPS4XP2-201ENST00000458402 793 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AC006511.1-201ENST00000470614 315 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 VN1R105P-201ENST00000486595 910 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AC092045.1-201ENST00000495716 1231 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 MTND3P24-201ENST00000506306 329 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AC010468.3-201ENST00000508225 458 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 HAUS1P3-201ENST00000523909 662 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 CIR1P1-201ENST00000524055 1133 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 OSBPL9P3-201ENST00000534523 595 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AC025260.1-201ENST00000548858 430 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AL161713.1-201ENST00000555538 145 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AC106785.3-201ENST00000564064 847 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC58Q96CX6 RN7SL703P-201ENST00000578485 302 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 RNU1-30P-201ENST00000606575 163 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 AC011374.2-201ENST00000607135 526 ntBASIC3.4□□□□□ -1.87
LRRC58Q96CX6 FP236240.3-201ENST00000623061 327 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms