Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC024341.1-201ENST00000526444 1552 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 MIR16-2-201ENST00000362117 81 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 BTBD10P2-201ENST00000404779 676 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 SNORA11C-201ENST00000408532 129 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC092832.1-201ENST00000422934 400 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 RPS12P5-201ENST00000423449 371 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 HMGB3P5-201ENST00000428894 612 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AL512661.1-201ENST00000434586 1253 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 ANP32BP2-201ENST00000454525 545 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 RPL21P47-201ENST00000483696 477 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 HMGN1P11-201ENST00000508668 303 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 MIR2114-201ENST00000516645 80 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 RNU6-579P-201ENST00000516879 102 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 CENPUP2-201ENST00000555897 1186 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC107982.3-201ENST00000584957 985 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC091488.1-201ENST00000604239 660 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 RNU1-30P-201ENST00000606575 163 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC024941.1-201ENST00000612250 334 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC006213.5-201ENST00000619673 288 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 AC097460.3-201ENST00000623099 442 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 MIR4496-201ENST00000635896 61 ntBASIC3.52□□□□□ -1.85
UBE2E3Q969T4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.52□□□□□ -1.85
UBE2E3Q969T4 MTND4P8-201ENST00000514997 1362 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 OR11H5P-202ENST00000641612 1325 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC007685.1-201ENST00000329806 452 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AL391417.1-201ENST00000404100 426 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AL445183.3-201ENST00000414168 502 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 MTCO1P43-201ENST00000431831 488 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 USP9YP7-201ENST00000436723 430 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC074367.1-201ENST00000438685 1125 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC092170.1-201ENST00000440211 356 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 RPL7P55-201ENST00000450522 746 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC233982.1-201ENST00000451247 436 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 BX276092.4-201ENST00000452056 248 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 USP9YP32-201ENST00000452432 430 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 CYCSP20-201ENST00000473154 315 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 PTGES3P3-201ENST00000511479 482 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC008011.1-201ENST00000545989 227 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC095057.3-201ENST00000567102 1157 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 AC006065.5-201ENST00000623427 349 ntBASIC3.51□□□□□ -1.85
UBE2E3Q969T4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms