Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HPS3Q969F9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HPS3Q969F9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HPS3Q969F9 CR381670.1-201ENST00000624291 1693 ntBASIC5.13□□□□□ -1.59
HPS3Q969F9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HPS3Q969F9 EIF4A1P3-201ENST00000411521 244 ntBASIC5.13□□□□□ -1.59
HPS3Q969F9 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.13□□□□□ -1.59
HPS3Q969F9 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.13□□□□□ -1.59
HPS3Q969F9 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.13□□□□□ -1.59
HPS3Q969F9 AL049745.1-201ENST00000433953 286 ntBASIC5.13□□□□□ -1.59
HPS3Q969F9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.13□□□□□ -1.59
HPS3Q969F9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.13□□□□□ -1.59
HPS3Q969F9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.13□□□□□ -1.59
HPS3Q969F9 snoU13.7-201ENST00000459220 104 ntBASIC5.13□□□□□ -1.59
HPS3Q969F9 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.13□□□□□ -1.59
HPS3Q969F9 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.13□□□□□ -1.59
HPS3Q969F9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.13□□□□□ -1.59
HPS3Q969F9 AC022790.1-201ENST00000522872 204 ntBASIC5.13□□□□□ -1.59
HPS3Q969F9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.13□□□□□ -1.59
HPS3Q969F9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HPS3Q969F9 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.13□□□□□ -1.59
HPS3Q969F9 PDCD5P1-201ENST00000543528 309 ntBASIC5.13□□□□□ -1.59
HPS3Q969F9 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.13□□□□□ -1.59
HPS3Q969F9 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.13□□□□□ -1.59
HPS3Q969F9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.13□□□□□ -1.59
HPS3Q969F9 AC091042.1-201ENST00000579213 173 ntBASIC5.13□□□□□ -1.59
HPS3Q969F9 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.13□□□□□ -1.59
HPS3Q969F9 RNU6-88P-201ENST00000606801 100 ntBASIC5.13□□□□□ -1.59
HPS3Q969F9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.13□□□□□ -1.59
HPS3Q969F9 AC099063.3-201ENST00000642066 185 ntBASIC5.13□□□□□ -1.59
HPS3Q969F9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.13□□□□□ -1.59
HPS3Q969F9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HPS3Q969F9 AC135352.1-201ENST00000506173 1418 ntBASIC5.13□□□□□ -1.59
HPS3Q969F9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
HPS3Q969F9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HPS3Q969F9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HPS3Q969F9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HPS3Q969F9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HPS3Q969F9 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.12□□□□□ -1.59
HPS3Q969F9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HPS3Q969F9 MTND5P24-201ENST00000438892 1767 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 RNU6-500P-201ENST00000362349 107 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 RNA5SP151-201ENST00000365632 117 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 SNORA56-201ENST00000383966 129 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 MIR659-201ENST00000384963 97 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 RPS4XP9-201ENST00000405151 780 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.12□□□□□ -1.59
HPS3Q969F9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.12□□□□□ -1.59
HPS3Q969F9 RPL23AP39-201ENST00000415533 405 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AL807761.1-201ENST00000417622 171 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 BX510359.2-201ENST00000417920 305 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC245028.1-201ENST00000423259 256 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC093698.1-201ENST00000423843 571 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 COX6CP15-201ENST00000426313 211 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 MTND1P20-201ENST00000430341 950 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 MED14P1-201ENST00000430517 648 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.12□□□□□ -1.59
HPS3Q969F9 AC129850.1-201ENST00000436203 508 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.12□□□□□ -1.59
HPS3Q969F9 RPS26P2-201ENST00000440331 348 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.12□□□□□ -1.59
HPS3Q969F9 H2AFZP5-201ENST00000446960 382 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 TPT1P13-201ENST00000449760 499 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC073387.1-201ENST00000453261 709 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.12□□□□□ -1.59
HPS3Q969F9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
HPS3Q969F9 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.12□□□□□ -1.59
HPS3Q969F9 AC112198.1-201ENST00000505369 1220 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.12□□□□□ -1.59
HPS3Q969F9 OR51K1P-201ENST00000510214 950 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.12□□□□□ -1.59
HPS3Q969F9 MTND5P13-201ENST00000513046 1079 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.12□□□□□ -1.59
HPS3Q969F9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.12□□□□□ -1.59
HPS3Q969F9 RNA5SP216-201ENST00000516111 123 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HPS3Q969F9 DEFB131D-201ENST00000526803 184 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 OR7K1P-201ENST00000546439 926 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC008127.2-201ENST00000549925 1075 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.12□□□□□ -1.59
HPS3Q969F9 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.12□□□□□ -1.59
HPS3Q969F9 ACTR3BP3-201ENST00000565577 979 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.12□□□□□ -1.59
HPS3Q969F9 AC020914.6-201ENST00000594327 272 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AL031985.2-201ENST00000600955 480 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AL596327.1-201ENST00000603629 213 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC135507.1-201ENST00000607214 561 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC011939.3-201ENST00000613686 466 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 Z69908.1-201ENST00000622603 247 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC005086.4-201ENST00000623065 213 ntBASIC5.12□□□□□ -1.59
HPS3Q969F9 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.12□□□□□ -1.59
HPS3Q969F9 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.12□□□□□ -1.59
HPS3Q969F9 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.12□□□□□ -1.59
HPS3Q969F9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
HPS3Q969F9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HPS3Q969F9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HPS3Q969F9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.12□□□□□ -1.59
HPS3Q969F9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HPS3Q969F9 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.12□□□□□ -1.59
HPS3Q969F9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms