Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RN7SL475P-201ENST00000583379 298 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 MIR5692C1-201ENST00000585309 91 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.71□□□□□ -1.34
HLA-CQ95604 AP001823.1-201ENST00000604056 1003 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 AL031320.1-201ENST00000604177 357 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 AL589674.2-201ENST00000604304 337 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.71□□□□□ -1.34
HLA-CQ95604 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.71□□□□□ -1.34
HLA-CQ95604 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HLA-CQ95604 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
HLA-CQ95604 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.71□□□□□ -1.34
HLA-CQ95604 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 AC009948.5-201ENST00000624360 4406 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HLA-CQ95604 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 EXOC5P1-201ENST00000510543 1969 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
HLA-CQ95604 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.71□□□□□ -1.34
HLA-CQ95604 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.71□□□□□ -1.34
HLA-CQ95604 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-CQ95604 ZNF734P-201ENST00000419494 1534 ntBASIC6.71□□□□□ -1.34
HLA-CQ95604 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HLA-CQ95604 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.7□□□□□ -1.34
HLA-CQ95604 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.7□□□□□ -1.34
HLA-CQ95604 AC007993.1-201ENST00000621298 2430 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.7□□□□□ -1.34
HLA-CQ95604 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
HLA-CQ95604 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
HLA-CQ95604 AC233263.6-201ENST00000631132 1963 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 RNU1-134P-201ENST00000362935 165 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 Y_RNA.106-201ENST00000363189 100 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 Y_RNA.478-201ENST00000384358 107 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 RPL21P1-201ENST00000399532 476 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 AL121835.1-201ENST00000404250 354 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 SPTLC1P2-201ENST00000407089 121 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 RNU6-293P-201ENST00000411259 106 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-CQ95604 RPL30P2-201ENST00000414021 291 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 AC016027.5-201ENST00000427227 210 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 HMGB1P9-201ENST00000429856 646 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.7□□□□□ -1.34
HLA-CQ95604 RPS4XP23-201ENST00000487801 237 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-CQ95604 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-CQ95604 AP000889.1-201ENST00000530968 660 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-CQ95604 AL049779.3-201ENST00000557141 606 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 AC013283.1-201ENST00000557282 492 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-CQ95604 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-CQ95604 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.7□□□□□ -1.34
HLA-CQ95604 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.7□□□□□ -1.34
HLA-CQ95604 AC233702.7-202ENST00000582941 211 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 AC011626.1-201ENST00000604710 562 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 AL512329.2-201ENST00000607350 548 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.7□□□□□ -1.34
HLA-CQ95604 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-CQ95604 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC6.7□□□□□ -1.34
HLA-CQ95604 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 SALL4P7-201ENST00000555779 3120 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.7□□□□□ -1.34
HLA-CQ95604 ZNF33CP-201ENST00000432492 2030 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 AC116667.1-201ENST00000604855 2072 ntBASIC6.7□□□□□ -1.34
HLA-CQ95604 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.7□□□□□ -1.34
HLA-CQ95604 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-CQ95604 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 AC010615.1-201ENST00000594254 1764 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
HLA-CQ95604 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
HLA-CQ95604 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.69□□□□□ -1.34
HLA-CQ95604 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.69□□□□□ -1.34
HLA-CQ95604 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-CQ95604 AC011008.2-201ENST00000624866 3352 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 SNORD16-201ENST00000362803 99 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.69□□□□□ -1.34
HLA-CQ95604 RNA5SP346-201ENST00000363541 121 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms