Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 MIR5004-201ENST00000579078 107 ntBASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 AC119744.1-201ENST00000454746 1715 ntBASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
SHROOM3Q8TF72 ZNF807-201ENST00000328088 1707 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AL513175.1-201ENST00000431492 780 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 RPL23AP67-201ENST00000465341 474 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC091544.1-201ENST00000484702 348 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 RN7SKP116-201ENST00000516902 319 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC087888.1-201ENST00000550884 1254 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC124856.1-201ENST00000600819 896 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AL162713.1-201ENST00000604480 262 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AL365400.2-201ENST00000605604 902 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AL008729.2-201ENST00000606393 473 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC019080.5-201ENST00000624891 757 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 MTND4P10-201ENST00000446199 1363 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 ELL2P4-201ENST00000446870 1376 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 CR383658.2-201ENST00000547576 1525 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC126124.2-201ENST00000413542 321 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 RPS12P23-201ENST00000419579 400 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AP000859.1-201ENST00000525536 307 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC135001.1-201ENST00000544546 283 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC004024.1-201ENST00000549244 247 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 AC009464.1-201ENST00000615731 469 ntBASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHROOM3Q8TF72 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 SNORD67-201ENST00000390833 111 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 SNORA48.8-201ENST00000391324 134 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AC007899.1-201ENST00000412776 775 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AC087276.1-201ENST00000529659 480 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AL139174.1-201ENST00000531489 886 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 PDCL2P2-201ENST00000533651 189 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 UBE2NP1-201ENST00000545592 458 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AC115989.2-201ENST00000578640 563 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AL451007.1-201ENST00000595491 289 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AL157817.1-201ENST00000614264 790 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AC018692.3-201ENST00000623929 123 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AC073476.4-201ENST00000628409 72 ntBASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SHROOM3Q8TF72 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 MIR184-201ENST00000384962 84 ntBASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 HMGB3P18-201ENST00000406327 590 ntBASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 RPS7P13-201ENST00000413955 498 ntBASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 AC012065.2-201ENST00000421295 375 ntBASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 AP002371.1-201ENST00000463604 433 ntBASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 AC080014.1-201ENST00000496877 1201 ntBASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 AC015849.6-201ENST00000605454 474 ntBASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms