Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 CYCSP12-201ENST00000437729 300 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 NPM1P39-201ENST00000449818 867 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 SNORD125-201ENST00000459538 96 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AC128716.1-201ENST00000475129 166 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 UBA52P7-201ENST00000486088 380 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 RN7SL629P-201ENST00000489622 285 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 RPS17P5-201ENST00000498293 408 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 SNORD60.2-201ENST00000516883 86 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 SNORA48.10-201ENST00000516965 160 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AC105031.1-201ENST00000518550 476 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 APOOP3-201ENST00000536787 586 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 APOOP1-201ENST00000604695 592 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AL592436.1-201ENST00000605135 558 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AL352984.2-202ENST00000613699 155 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AC005899.7-201ENST00000618199 588 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AC024023.1-201ENST00000624530 922 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 OR4F13P-202ENST00000560066 2054 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 MTND5P6-201ENST00000422338 1798 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AC006378.2-201ENST00000623178 2476 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 RNA5SP183-201ENST00000362452 119 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 MRPL42P3-201ENST00000401492 326 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AL451054.2-201ENST00000420896 202 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 OR10T1P-201ENST00000424327 947 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 RPS27AP6-201ENST00000427962 448 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AC104306.1-201ENST00000449702 371 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 RPL18AP17-201ENST00000455326 198 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 COPS8P2-201ENST00000473228 627 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 RN7SL214P-201ENST00000487317 265 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 RPS4XP14-201ENST00000493072 781 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 GAPDHP56-201ENST00000506031 988 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 MTCYBP40-201ENST00000509390 1135 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 GAPDHP62-201ENST00000515313 990 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AC004696.1-201ENST00000614345 607 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AL137141.1-201ENST00000624622 4836 ntBASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.49□□□□□ -1.37
NEDD1Q8NHV4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 RNA5SP335-201ENST00000363817 110 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 SNORA16A-201ENST00000384342 137 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 Y_RNA.527-201ENST00000384573 102 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 SNORD115.1-201ENST00000391109 76 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms