Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC105233.3-201ENST00000531125 744 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC069240.1-201ENST00000548774 375 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC004217.3-201ENST00000551552 878 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 MRPS35P3-201ENST00000603189 709 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC020910.2-201ENST00000603635 610 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AL031666.3-201ENST00000609320 1006 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AC079416.3-201ENST00000624479 549 ntBASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDH20Q8N6Y1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC011266.1-201ENST00000624119 3569 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AL121657.1-201ENST00000327215 531 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 RNU6-83P-201ENST00000384568 112 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 TMSB4XP8-201ENST00000402089 135 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 RNU6-272P-201ENST00000411028 104 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 TMSB4XP6-201ENST00000415187 135 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC004552.1-201ENST00000419089 348 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 TMSB4XP1-201ENST00000424567 135 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC004975.1-201ENST00000428733 208 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 RPS26P40-201ENST00000435209 294 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 COX7BP2-201ENST00000437976 242 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 HMGB1P48-201ENST00000446155 598 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 EXTL2P1-201ENST00000446218 416 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC114755.5-201ENST00000447760 831 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 RNA5SP246-201ENST00000458909 119 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 RPS26P3-201ENST00000470205 348 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC006511.1-201ENST00000470614 315 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC104689.1-201ENST00000473356 768 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 VPS26AP1-201ENST00000483197 979 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC090543.2-201ENST00000483963 348 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC004057.1-201ENST00000485827 348 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 BNIP3P41-201ENST00000503774 571 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC005351.1-201ENST00000511152 786 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC093755.1-201ENST00000512950 1023 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC119751.5-201ENST00000514077 770 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 RNU5A-4P-201ENST00000516588 111 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC090819.1-201ENST00000523800 1111 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AP001636.2-201ENST00000525517 696 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC091488.1-201ENST00000604239 660 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AP003392.5-201ENST00000607857 415 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AP000255.1-201ENST00000610276 676 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC026368.1-201ENST00000614934 690 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC105227.2-201ENST00000615075 605 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 AC105074.1-201ENST00000623380 3095 ntBASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDH20Q8N6Y1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 DCAF13P3-201ENST00000561147 1334 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 USP9YP4-201ENST00000424401 1745 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms