Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 SNORD105B-201ENST00000458770 79 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC004801.2-202ENST00000463559 283 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 FAM133DP-201ENST00000464802 691 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC091959.2-201ENST00000477363 321 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC020893.1-201ENST00000502452 580 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 PCNAP1-201ENST00000505363 709 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 RNU6-751P-201ENST00000516382 101 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC106785.1-201ENST00000565935 262 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC112503.1-201ENST00000608436 391 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 MIR7973-1-201ENST00000614683 76 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 U7.8-201ENST00000619968 63 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 AC112200.1-201ENST00000625015 234 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 MFSD8-236ENST00000641509 4050 ntBASIC3.61□□□□□ -1.83
CDKL3Q8IVW4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 AC090337.1-201ENST00000579651 2074 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 RN7SKP280-201ENST00000364196 304 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 MIR7-1-201ENST00000384871 110 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 RPS24P8-201ENST00000431490 402 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 NOTCH2P1-201ENST00000443481 624 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 CDC27P1-201ENST00000445384 715 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 AC021087.2-201ENST00000504656 1203 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 SNORA70.18-201ENST00000516696 98 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 SOD1P3-201ENST00000518682 454 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 AC005972.3-201ENST00000606304 481 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 AC110801.1-201ENST00000623590 212 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 AC058791.1-201ENST00000608412 3198 ntBASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDKL3Q8IVW4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 RNU6-152P-201ENST00000384037 107 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 MTCO3P31-201ENST00000405526 789 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AL445189.1-201ENST00000405722 338 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 RNU6-55P-201ENST00000411092 107 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 RNU6-954P-201ENST00000411355 107 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AL356806.1-201ENST00000422524 916 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AL513174.1-201ENST00000423182 629 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 RNF19BPX-201ENST00000426224 625 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AL031736.2-201ENST00000426573 787 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 SETP5-201ENST00000437270 562 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 CBX1P4-201ENST00000439415 457 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 TPMTP4-201ENST00000450749 678 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 MRPS31P2-201ENST00000451581 518 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 RPL23AP67-201ENST00000465341 474 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AL035404.1-201ENST00000497982 568 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 RN7SKP18-201ENST00000516005 275 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 RNU6-491P-201ENST00000516099 110 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 PDCL2P2-201ENST00000533651 189 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 MTATP6P25-201ENST00000574491 261 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 MIR3186-201ENST00000577404 85 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AC006116.10-201ENST00000591836 581 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AC020914.6-201ENST00000594327 272 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AC010591.1-201ENST00000603941 649 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AC055764.2-201ENST00000610089 670 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 RMST_8.1-201ENST00000610287 165 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 U4.6-201ENST00000621618 127 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AL161637.1-201ENST00000622380 412 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 AL353746.1-201ENST00000566293 6881 ntBASIC3.59□□□□□ -1.83
CDKL3Q8IVW4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDKL3Q8IVW4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CDKL3Q8IVW4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CDKL3Q8IVW4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDKL3Q8IVW4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms