Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC107982.3-201ENST00000584957 985 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 Z82195.1-201ENST00000604558 398 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.57□□□□□ -2
SCXQ7RTU7 AC015802.5-201ENST00000607478 399 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 MIR6868-201ENST00000611215 58 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AC112200.1-201ENST00000625015 234 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.57□□□□□ -2
SCXQ7RTU7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.57□□□□□ -2
SCXQ7RTU7 BDP1P-201ENST00000582658 1990 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
SCXQ7RTU7 AC009501.3-201ENST00000605001 1352 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.57□□□□□ -2
SCXQ7RTU7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
SCXQ7RTU7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.57□□□□□ -2
SCXQ7RTU7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCXQ7RTU7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCXQ7RTU7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
SCXQ7RTU7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 MAPK10-373ENST00000641983 6772 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.56□□□□□ -2
SCXQ7RTU7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.56□□□□□ -2
SCXQ7RTU7 SNORD115-48-201ENST00000364764 76 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
SCXQ7RTU7 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.56□□□□□ -2
SCXQ7RTU7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.56□□□□□ -2
SCXQ7RTU7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.56□□□□□ -2
SCXQ7RTU7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.56□□□□□ -2
SCXQ7RTU7 RNA5SP171-201ENST00000391071 115 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 TAF9BP2-201ENST00000400856 499 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 RPL23AP47-201ENST00000408017 460 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 RHEBP3-201ENST00000411920 351 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 CRYBB2P1-203ENST00000415709 538 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 MTND4LP14-201ENST00000429447 288 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AC018644.1-201ENST00000429934 551 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.56□□□□□ -2
SCXQ7RTU7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.56□□□□□ -2
SCXQ7RTU7 AC009263.1-201ENST00000441193 1239 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 VN1R25P-201ENST00000443385 738 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC2.56□□□□□ -2
SCXQ7RTU7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.56□□□□□ -2
SCXQ7RTU7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.56□□□□□ -2
SCXQ7RTU7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.56□□□□□ -2
SCXQ7RTU7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC2.56□□□□□ -2
SCXQ7RTU7 VN1R40P-201ENST00000455196 941 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 RNU7-170P-201ENST00000459303 61 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.56□□□□□ -2
SCXQ7RTU7 AL139099.1-201ENST00000497398 403 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.56□□□□□ -2
SCXQ7RTU7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.56□□□□□ -2
SCXQ7RTU7 KRT19P6-201ENST00000510983 209 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AC021146.1-201ENST00000511202 716 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.56□□□□□ -2
SCXQ7RTU7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.56□□□□□ -2
SCXQ7RTU7 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.56□□□□□ -2
SCXQ7RTU7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.56□□□□□ -2
SCXQ7RTU7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.56□□□□□ -2
SCXQ7RTU7 RPL23AP87-202ENST00000573039 466 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.56□□□□□ -2
SCXQ7RTU7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 AC006254.3-201ENST00000603353 884 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AL034351.1-201ENST00000605288 668 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 BX322635.1-201ENST00000605804 496 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.56□□□□□ -2
SCXQ7RTU7 AC064801.1-201ENST00000612025 407 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AC005156.1-201ENST00000613371 573 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AC090246.1-201ENST00000616499 426 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.56□□□□□ -2
SCXQ7RTU7 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 AL354798.1-201ENST00000622505 329 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 AC021755.1-201ENST00000559747 1447 ntBASIC2.56□□□□□ -2
SCXQ7RTU7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
SCXQ7RTU7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SCXQ7RTU7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.56□□□□□ -2
SCXQ7RTU7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
SCXQ7RTU7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
SCXQ7RTU7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.55□□□□□ -2
SCXQ7RTU7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCXQ7RTU7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SCXQ7RTU7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC2.55□□□□□ -2
SCXQ7RTU7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SCXQ7RTU7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SCXQ7RTU7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
SCXQ7RTU7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.55□□□□□ -2
SCXQ7RTU7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.55□□□□□ -2
SCXQ7RTU7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SCXQ7RTU7 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC2.55□□□□□ -2
SCXQ7RTU7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.55□□□□□ -2
SCXQ7RTU7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SCXQ7RTU7 MIR200C-201ENST00000384980 68 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC2.55□□□□□ -2
SCXQ7RTU7 RPL21P109-201ENST00000422213 475 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms