Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC244258.1-201ENST00000637553 1071 ntBASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHROOM1Q2M3G4 AC017007.4-201ENST00000503353 1352 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 MIR491-201ENST00000384877 84 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 MIR93-201ENST00000385024 80 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 RNA5SP424-201ENST00000390988 115 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 CYCSP4-201ENST00000429682 331 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 ELOCP11-201ENST00000436690 332 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC105402.2-201ENST00000438503 358 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 ELOCP8-201ENST00000439309 332 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 ELOCP15-201ENST00000442090 332 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 ELOCP16-201ENST00000444494 332 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC104978.1-201ENST00000449387 391 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 CYCSP35-201ENST00000451978 304 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 RPL5P23-201ENST00000496040 868 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC068305.1-201ENST00000497406 726 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC103833.1-201ENST00000517442 172 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 UBTFL9-201ENST00000534504 1148 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC020914.6-201ENST00000594327 272 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AL592494.2-201ENST00000425455 1548 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 LINC00561-201ENST00000565815 2738 ntBASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SHROOM1Q2M3G4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 EIF5P1-201ENST00000400019 1231 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 HNRNPDP2-201ENST00000406475 478 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 RPL17P35-201ENST00000432217 549 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 USP9YP7-201ENST00000436723 430 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 PPIAP17-201ENST00000438507 471 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 AC115115.1-201ENST00000449927 248 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 USP9YP32-201ENST00000452432 430 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 RNU6-1102P-201ENST00000516149 96 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 SNORA74D-201ENST00000516404 141 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 AP002812.4-201ENST00000532139 286 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 AP004242.1-201ENST00000533701 349 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 AC015849.2-201ENST00000605738 409 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 AC090617.9-201ENST00000623751 147 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 AC007656.2-201ENST00000624902 4547 ntBASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
SHROOM1Q2M3G4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms