Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RN7SKP194-201ENST00000411328 351 ntBASIC2.03□□□□□ -2.08
RPS28P62857 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RPS28P62857 AL606490.7-201ENST00000433136 191 ntBASIC2.03□□□□□ -2.08
RPS28P62857 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
RPS28P62857 CYCSP6-201ENST00000434498 302 ntBASIC2.03□□□□□ -2.08
RPS28P62857 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC2.03□□□□□ -2.08
RPS28P62857 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC2.03□□□□□ -2.08
RPS28P62857 AC011753.1-201ENST00000451001 220 ntBASIC2.03□□□□□ -2.08
RPS28P62857 AC099563.1-201ENST00000456086 418 ntBASIC2.03□□□□□ -2.08
RPS28P62857 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC2.03□□□□□ -2.08
RPS28P62857 AP004217.1-201ENST00000480579 346 ntBASIC2.03□□□□□ -2.08
RPS28P62857 AC041039.1-201ENST00000485656 536 ntBASIC2.03□□□□□ -2.08
RPS28P62857 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.03□□□□□ -2.08
RPS28P62857 RN7SL101P-201ENST00000496350 279 ntBASIC2.03□□□□□ -2.08
RPS28P62857 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.03□□□□□ -2.08
RPS28P62857 RPS4XP20-201ENST00000505751 772 ntBASIC2.03□□□□□ -2.08
RPS28P62857 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC2.03□□□□□ -2.08
RPS28P62857 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.03□□□□□ -2.08
RPS28P62857 PRELID3BP4-201ENST00000515476 571 ntBASIC2.03□□□□□ -2.08
RPS28P62857 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.03□□□□□ -2.08
RPS28P62857 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC2.03□□□□□ -2.08
RPS28P62857 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.03□□□□□ -2.08
RPS28P62857 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RPS28P62857 AL132640.2-202ENST00000559732 614 ntBASIC2.03□□□□□ -2.08
RPS28P62857 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.03□□□□□ -2.08
RPS28P62857 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
RPS28P62857 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC2.03□□□□□ -2.08
RPS28P62857 MIR4436B2-201ENST00000581415 91 ntBASIC2.03□□□□□ -2.08
RPS28P62857 MIR4436B1-201ENST00000583272 91 ntBASIC2.03□□□□□ -2.08
RPS28P62857 MIR4658-201ENST00000584344 65 ntBASIC2.03□□□□□ -2.08
RPS28P62857 OR1M4P-201ENST00000589199 287 ntBASIC2.03□□□□□ -2.08
RPS28P62857 TREM1-204ENST00000589614 772 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
RPS28P62857 AC013468.1-201ENST00000608680 598 ntBASIC2.03□□□□□ -2.08
RPS28P62857 AC104237.2-201ENST00000612456 443 ntBASIC2.03□□□□□ -2.08
RPS28P62857 MIR6895-201ENST00000613497 78 ntBASIC2.03□□□□□ -2.08
RPS28P62857 MIR6891-201ENST00000618788 93 ntBASIC2.03□□□□□ -2.08
RPS28P62857 CYP3A51P-201ENST00000633513 256 ntBASIC2.03□□□□□ -2.08
RPS28P62857 BX649567.1-201ENST00000642071 1134 ntBASIC2.03□□□□□ -2.08
RPS28P62857 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RPS28P62857 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC2.03□□□□□ -2.08
RPS28P62857 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
RPS28P62857 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.03□□□□□ -2.09
RPS28P62857 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
RPS28P62857 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
RPS28P62857 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.03□□□□□ -2.09
RPS28P62857 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RPS28P62857 Z82209.1-201ENST00000422141 2135 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AL512646.1-201ENST00000269395 1077 ntBASIC2.02□□□□□ -2.09
RPS28P62857 RNA5SP443-201ENST00000363083 132 ntBASIC2.02□□□□□ -2.09
RPS28P62857 MIR3065-201ENST00000390137 79 ntBASIC2.02□□□□□ -2.09
RPS28P62857 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
RPS28P62857 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RPS28P62857 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC2.02□□□□□ -2.09
RPS28P62857 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.02□□□□□ -2.09
RPS28P62857 Z75741.2-201ENST00000417272 1167 ntBASIC2.02□□□□□ -2.09
RPS28P62857 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.02□□□□□ -2.09
RPS28P62857 YY1P1-201ENST00000427625 668 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AC079780.1-201ENST00000428259 207 ntBASIC2.02□□□□□ -2.09
RPS28P62857 OR4K11P-201ENST00000431829 904 ntBASIC2.02□□□□□ -2.09
RPS28P62857 FTH1P16-201ENST00000435241 552 ntBASIC2.02□□□□□ -2.09
RPS28P62857 Z74696.2-201ENST00000436514 498 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.02□□□□□ -2.09
RPS28P62857 AC108463.1-201ENST00000450258 347 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.02□□□□□ -2.09
RPS28P62857 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.02□□□□□ -2.09
RPS28P62857 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.02□□□□□ -2.09
RPS28P62857 RPL23AP81-201ENST00000455252 467 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AC010099.1-201ENST00000455434 375 ntBASIC2.02□□□□□ -2.09
RPS28P62857 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RPS28P62857 RPL23AP56-201ENST00000460778 453 ntBASIC2.02□□□□□ -2.09
RPS28P62857 RN7SL385P-201ENST00000468873 276 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AC104763.1-201ENST00000475274 360 ntBASIC2.02□□□□□ -2.09
RPS28P62857 RPS4XP14-201ENST00000493072 781 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AC096751.1-202ENST00000502691 1067 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC2.02□□□□□ -2.09
RPS28P62857 HPRT1P1-201ENST00000509498 657 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC2.02□□□□□ -2.09
RPS28P62857 AC107934.2-201ENST00000518653 310 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC2.02□□□□□ -2.09
RPS28P62857 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.02□□□□□ -2.09
RPS28P62857 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.02□□□□□ -2.09
RPS28P62857 AC092470.1-201ENST00000546187 132 ntBASIC2.02□□□□□ -2.09
RPS28P62857 OR7K1P-201ENST00000546439 926 ntBASIC2.02□□□□□ -2.09
RPS28P62857 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.02□□□□□ -2.09
RPS28P62857 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC2.02□□□□□ -2.09
RPS28P62857 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.02□□□□□ -2.09
RPS28P62857 AC037479.1-201ENST00000558361 625 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC2.02□□□□□ -2.09
RPS28P62857 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.02□□□□□ -2.09
RPS28P62857 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.02□□□□□ -2.09
RPS28P62857 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.02□□□□□ -2.09
RPS28P62857 VN1R78P-201ENST00000597393 564 ntBASIC2.02□□□□□ -2.09
RPS28P62857 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RPS28P62857 NRBF2P5-201ENST00000603087 788 ntBASIC2.02□□□□□ -2.09
RPS28P62857 AL451044.1-201ENST00000604867 238 ntBASIC2.02□□□□□ -2.09
RPS28P62857 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.02□□□□□ -2.09
RPS28P62857 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.02□□□□□ -2.09
RPS28P62857 MIR6754-201ENST00000621121 66 ntBASIC2.02□□□□□ -2.09
RPS28P62857 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.02□□□□□ -2.09
RPS28P62857 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms