Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS2P54868 U3.19-201ENST00000390893 196 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 RNU6-1176P-201ENST00000390955 107 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS2P54868 RNA5SP498-201ENST00000411342 120 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCS2P54868 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCS2P54868 UBE2V1P1-201ENST00000430836 445 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGCS2P54868 AL157827.1-201ENST00000447622 132 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 AC239809.1-201ENST00000450470 217 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 AC078857.1-201ENST00000469870 667 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 AC005912.1-201ENST00000495392 255 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCS2P54868 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGCS2P54868 AC010285.3-201ENST00000511668 676 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGCS2P54868 AC010342.1-201ENST00000514047 877 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 RNU6-347P-201ENST00000516658 105 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 RN7SKP209-201ENST00000516888 304 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.07□□□□□ -1.76
HMGCS2P54868 AC090819.1-201ENST00000523800 1111 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 HAUS1P3-201ENST00000523909 662 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HMGCS2P54868 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCS2P54868 AC084757.1-201ENST00000559987 490 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.07□□□□□ -1.76
HMGCS2P54868 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCS2P54868 AC017076.1-201ENST00000607613 578 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 AL391834.1-201ENST00000609609 560 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGCS2P54868 AL354976.1-201ENST00000613843 387 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 AC006249.1-201ENST00000621223 471 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 AC090617.9-201ENST00000623751 147 ntBASIC4.07□□□□□ -1.76
HMGCS2P54868 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGCS2P54868 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGCS2P54868 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HMGCS2P54868 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS2P54868 GNG5P1-201ENST00000255500 204 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 OR52B1P-201ENST00000316506 909 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS2P54868 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HMGCS2P54868 AL512649.1-201ENST00000428997 581 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 NDUFA5P10-201ENST00000432147 357 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 SDR42E1P3-201ENST00000438345 502 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 MTCYBP12-201ENST00000440559 1134 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS2P54868 AL136126.1-201ENST00000473603 402 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGCS2P54868 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGCS2P54868 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS2P54868 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGCS2P54868 MIR4716-201ENST00000579628 84 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGCS2P54868 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGCS2P54868 AL606834.2-201ENST00000602954 668 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 AC015849.2-201ENST00000605738 409 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 AC009318.3-201ENST00000616916 503 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 uc_338.9-201ENST00000617424 182 ntBASIC4.06□□□□□ -1.76
HMGCS2P54868 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS2P54868 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HMGCS2P54868 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS2P54868 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS2P54868 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS2P54868 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGCS2P54868 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HMGCS2P54868 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGCS2P54868 AL592437.2-201ENST00000421655 2434 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGCS2P54868 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AC096656.1-201ENST00000623826 1364 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 AL118496.1-201ENST00000440201 1812 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
HMGCS2P54868 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGCS2P54868 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGCS2P54868 RNU6-650P-201ENST00000365658 111 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.05□□□□□ -1.76
HMGCS2P54868 RPS24P12-201ENST00000402084 394 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AL121882.1-201ENST00000422893 417 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 RPL7P44-201ENST00000424827 742 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 AC009965.2-201ENST00000425328 970 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS2P54868 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGCS2P54868 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS2P54868 RPL5P30-201ENST00000465511 891 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS2P54868 RPL7P23-201ENST00000493874 747 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 RN7SL504P-201ENST00000494496 287 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AC113430.1-201ENST00000506872 718 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS2P54868 UBE2NP1-201ENST00000545592 458 ntBASIC4.05□□□□□ -1.76
HMGCS2P54868 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.05□□□□□ -1.76
HMGCS2P54868 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms