Protein–RNA interactions for Protein: P53609

PGGT1B, Geranylgeranyl transferase type-1 subunit beta, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1BP53609 RNA5SP497-201ENST00000516081 97 ntBASIC4.32□□□□□ -1.72
PGGT1BP53609 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.32□□□□□ -1.72
PGGT1BP53609 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.32□□□□□ -1.72
PGGT1BP53609 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.32□□□□□ -1.72
PGGT1BP53609 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.32□□□□□ -1.72
PGGT1BP53609 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.32□□□□□ -1.72
PGGT1BP53609 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.32□□□□□ -1.72
PGGT1BP53609 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PGGT1BP53609 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.32□□□□□ -1.72
PGGT1BP53609 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.32□□□□□ -1.72
PGGT1BP53609 AC069061.3-201ENST00000582254 823 ntBASIC4.32□□□□□ -1.72
PGGT1BP53609 AC123786.2-201ENST00000603459 275 ntBASIC4.32□□□□□ -1.72
PGGT1BP53609 AL049539.1-201ENST00000611964 459 ntBASIC4.32□□□□□ -1.72
PGGT1BP53609 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.32□□□□□ -1.72
PGGT1BP53609 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.32□□□□□ -1.72
PGGT1BP53609 AC116165.2-201ENST00000616705 206 ntBASIC4.32□□□□□ -1.72
PGGT1BP53609 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.32□□□□□ -1.72
PGGT1BP53609 AC092192.1-201ENST00000633154 1018 ntBASIC4.32□□□□□ -1.72
PGGT1BP53609 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.32□□□□□ -1.72
PGGT1BP53609 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PGGT1BP53609 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PGGT1BP53609 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PGGT1BP53609 MFSD8-216ENST00000641147 4009 ntBASIC4.32□□□□□ -1.72
PGGT1BP53609 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PGGT1BP53609 NSRP1P1-201ENST00000444067 1693 ntBASIC4.32□□□□□ -1.72
PGGT1BP53609 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.32□□□□□ -1.72
PGGT1BP53609 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PGGT1BP53609 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PGGT1BP53609 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.31□□□□□ -1.72
PGGT1BP53609 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.31□□□□□ -1.72
PGGT1BP53609 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PGGT1BP53609 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PGGT1BP53609 AL672167.1-206ENST00000356293 943 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 RNU6-931P-201ENST00000363850 107 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 RNA5SP332-201ENST00000391063 115 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.31□□□□□ -1.72
PGGT1BP53609 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PGGT1BP53609 TPMTP3-201ENST00000411928 735 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC099336.2-201ENST00000422457 254 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC073335.1-201ENST00000427776 363 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 USP9YP31-201ENST00000431405 881 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 SEPT7P5-201ENST00000434048 306 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AL031663.1-201ENST00000437445 219 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 RPS24P1-201ENST00000438550 371 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.31□□□□□ -1.72
PGGT1BP53609 TPMTP4-201ENST00000450749 678 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC099560.2-201ENST00000457554 255 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 RPL23AP65-201ENST00000475608 468 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 TRBV8-2-201ENST00000475637 270 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC004069.2-201ENST00000505438 1114 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC105233.3-201ENST00000531125 744 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC005832.3-201ENST00000537929 631 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC068831.4-201ENST00000556118 109 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 MTATP6P3-201ENST00000581686 676 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.31□□□□□ -1.72
PGGT1BP53609 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC115286.1-201ENST00000604298 434 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC069545.1-201ENST00000605671 358 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC087752.4-201ENST00000605911 462 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC239868.4-201ENST00000608318 671 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC023158.2-201ENST00000614876 543 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 MIR6780A-201ENST00000615089 68 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 AC018755.4-201ENST00000619715 454 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.31□□□□□ -1.72
PGGT1BP53609 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC055839.1-201ENST00000634467 498 ntBASIC4.31□□□□□ -1.72
PGGT1BP53609 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PGGT1BP53609 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PGGT1BP53609 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.31□□□□□ -1.72
PGGT1BP53609 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.31□□□□□ -1.72
PGGT1BP53609 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PGGT1BP53609 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PGGT1BP53609 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PGGT1BP53609 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PGGT1BP53609 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.31□□□□□ -1.72
PGGT1BP53609 AC005539.1-201ENST00000443768 1479 ntBASIC4.3□□□□□ -1.72
PGGT1BP53609 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PGGT1BP53609 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.3□□□□□ -1.72
PGGT1BP53609 DHX40P1-201ENST00000588725 1412 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms